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The map label for this gene is sufD [C]

Identifier: 33863871

GI number: 33863871

Start: 1703777

End: 1705027

Strand: Reverse

Name: sufD [C]

Synonym: PMT1604

Alternate gene names: 33863871

Gene position: 1705027-1703777 (Counterclockwise)

Preceding gene: 33863872

Following gene: 33863870

Centisome position: 70.72

GC content: 54.04

Gene sequence:

>1251_bases
ATGGTGGAAGCCCCCATCAAGAACTCCTCAGCTCTCGATGACTGGTGTGAGCGGCTCTTGCACAGTCTTGAAGCCCCATC
AGGTCCGATGGCTGCCTGCCAGGCTCAGTCGCGCAATCACCTTGAAACCCTCTCTGCTCCTCATCGTCGACAGGAGGCAT
GGCGTTTTTGTGATCTTGCACCCATCGCTGAACTTGAGCCTCGACAGATTTGCTCTCTAGGTGAGCCATCGGCTCCTGGT
GTTTCTGATCAGGTGACACGTCTGGTCTTAGGGACGGGGCAGGATCCTTTCGCTGGAGTGACTCTCCCGAAGGGCCTGTC
GCCGCTTAGCGATGCGGAACTCAAGCATTCTCTCGGGCACACTTTGAACCTGGCGACATCCAAAGGCCAATGGCCTGTGG
CGTTGAATCAGGCCATCGCTTCACAAGTCATTGGCTTGAGGGTTCGCGGGATAGTGGATAGCCCTCTTGAATTGGTGTGT
GATGCCGGCGTCGATCGGGGTGTTTTTGCCGTGCGGGTGCTCTTGCTCCTTGAGGAAAAGGCCAAGCTTGAGTTGCTACA
AGTTCAGCTGAGTTCAGGTGCCAATCTCACCAGCGTTTTGGTGGAAGCTCACTTGCAAAGTGAGGCCAAGTTTCATCATG
GCCTTCTAGCTTTCGGCCATCCTCAAGCTGCATTATTGGCTCATCTTGCTGTTGAGCAGGAACCAAGCAGTGATGTTTCC
CTGGTGAGTGTCTGTCAAGGTTGGGGTGTGATTCGTCATGAGCCCCAATTGATTCAGTTGAATGGTGGTGCCAAGAGTCA
ATTGCGGGCCCTTCAACTGGTGCAGGCTAATCAGCTTGCTGATACTCATTCCTGTGTGCGTTTTAATGGCCCGGAAGGAA
CCTTGGATCAACTTCACAAGGTAGTTGCAGCCGGTCATGGCCGCAGTGTTTTTAACGGGGTGGTGCAGGTGCCTCGTGAG
GGGCAGCGTACCGATGCCGCGCAGCTAAGTCGTAGCTTGTTGCTCTCAGATCGGGCCCGAATTGACACCAAGCCTGAGTT
GGAAATTGTTGCTGACGATGTGAAATGCGCTCATGGGGCCACAGTGAGTCGGCTTCAGCCGGAGGCACTTTTTTATCTTC
AAAGTCGCGGAATTTCACCTGATCAAGCCGCACAGCTTTTACTGCGTGCGTTTTGTGATGAGGTGATTTGCATGCTCCCA
TCTACTGCAAAGGCCTGGCGGCCTTTGGCTCGATTGTTGGATGGGGTTTGA

Upstream 100 bases:

>100_bases
GGAGGATTGTGCGCTCCGGTGACAAGGCGCTGGCACTTGAGTTGGAGCAACGAGGTTATGAATGGGTGGATCGTGAATTG
GATGCACTGGAGATGACCTG

Downstream 100 bases:

>100_bases
GTCGATCATGACCTCTTCCGTTAGTTCAGAGCAGAGCATGCCGTTGGAAATGGCAGCTGTAGAAACTTCAGCGAACCTGG
CAGAGCTCACGCGAGCGGAT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLAPIAELEPRQICSLGEPSAPG
VSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKGQWPVALNQAIASQVIGLRVRGIVDSPLELVC
DAGVDRGVFAVRVLLLLEEKAKLELLQVQLSSGANLTSVLVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVS
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFNGVVQVPRE
GQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP
STAKAWRPLARLLDGV

Sequences:

>Translated_416_residues
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLAPIAELEPRQICSLGEPSAPG
VSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKGQWPVALNQAIASQVIGLRVRGIVDSPLELVC
DAGVDRGVFAVRVLLLLEEKAKLELLQVQLSSGANLTSVLVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVS
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFNGVVQVPRE
GQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP
STAKAWRPLARLLDGV
>Mature_416_residues
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLAPIAELEPRQICSLGEPSAPG
VSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKGQWPVALNQAIASQVIGLRVRGIVDSPLELVC
DAGVDRGVFAVRVLLLLEEKAKLELLQVQLSSGANLTSVLVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVS
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFNGVVQVPRE
GQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP
STAKAWRPLARLLDGV

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=424, Percent_Identity=29.2452830188679, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI87081955, Length=280, Percent_Identity=22.1428571428571, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 44766; Mature: 44766

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PIAELEPRQICSLGEPSAPGVSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGH
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TLNLATSKGQWPVALNQAIASQVIGLRVRGIVDSPLELVCDAGVDRGVFAVRVLLLLEEK
EEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH
AKLELLQVQLSSGANLTSVLVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCHH
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK
HHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
VVAAGHGRSVFNGVVQVPREGQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGA
HHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCC
TVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLPSTAKAWRPLARLLDGV
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PIAELEPRQICSLGEPSAPGVSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGH
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TLNLATSKGQWPVALNQAIASQVIGLRVRGIVDSPLELVCDAGVDRGVFAVRVLLLLEEK
EEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH
AKLELLQVQLSSGANLTSVLVEAHLQSEAKFHHGLLAFGHPQAALLAHLAVEQEPSSDVS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCHH
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK
HHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
VVAAGHGRSVFNGVVQVPREGQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGA
HHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCC
TVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLPSTAKAWRPLARLLDGV
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]