Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863858

Identifier: 33863858

GI number: 33863858

Start: 1692026

End: 1693006

Strand: Direct

Name: 33863858

Synonym: PMT1591

Alternate gene names: NA

Gene position: 1692026-1693006 (Clockwise)

Preceding gene: 33863857

Following gene: 33863859

Centisome position: 70.18

GC content: 56.57

Gene sequence:

>981_bases
GTGGTCAATGCCAGTCTTAACTGGGGCAGCATTGTTGGAATCGTGCTTGCAGTAGGCGGTGCTCTGCTGTATTTCATGCG
ATCGTTCAAGCCTGCCTTAGCACGCGACTACGACGTCTTTTTCGCAGCCATCGGCCTCCTTTGTGGAGGAGTTTTCTTTT
TTCAGGGGTGGCGCCTGGATCCGATCCTGCAGTTCGGCGTGTTCCTGCTAGCCGGAACCACAATGTTTTTCGCCTACGAA
AGTGTCAGGTTGAGAGGCGTAGCTGTTGAGGGGGCTCGGCGTTCATCCTATTTCGATGATGCACCAGCCCCGCCTATCAA
CCAGGGTCGAGGCGGTGGCCTAAGGGGTGACTGGGATGAACCCTACGACCGCTTTGAGGAACCCCAACCGGTTCGACGAC
GCTTCTCCAGTCGAGACAACGACGATGCTGATCGCCCTCAAGAAGACTTATACCGGCCTCGCAGAACCACAAGAGCTGCA
ATACCAGAACAAGCAGCAAGCCGTCGCCGCAACAAGGAGGAAGAGTCCTGGGGCGAAGACTCAGAACGCTCTCGTCGCAT
GGCCCGATTCGGCCGCCAGGATGATGAACAAAACAATCGTCCTGACTTTGGAGAACGCCGCAATATTCGCCAAGATCAGC
GCCGGGGCAGCCGTCCCTCAGCCAATCAACAAACCACCAATCGAACCCAATTAAGCAACGAGCCAAGGTCTACGACGAGA
GGGGGCTACGGCTCATCAAGAAAACCTGGTGTACCTCAGGGGTCTCAGATTCGTCCCGAGGCTGAAGATGCGGCCTACTC
TCCTGCAAAGTCCAGGTCGACGGGATCCAGGCCCACAGCATCAAAGCCCTCCCGACCACAAGGCAATCCCTCAGCCACCA
GAACAGAAGCGGCGCCTCCTTCATCATCAATGCCTGAGCCAAGACGCTCAGCTCCGCGAAGTTCAAGACCTCGCGACAAC
AGTTCCCGTTTTGACGACTGA

Upstream 100 bases:

>100_bases
GTTGACCGAAACCTCAAAGCAGCCTTGGCGCACTTCGTAGACTGAGCCCAACGAGGTTGGTTTTCAACCTCCTGTTCAGG
CGTTTTCAGGGGGCGCAATT

Downstream 100 bases:

>100_bases
AGCCCATTGCCAACAACCTGCAGCAACTGATCCTGCTTTTGGGGTGCCTGAGCCTTGGGAGCTGCATCAATTCGATTGAG
AGAGCACCAGGTGGCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE
SVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDEPYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAA
IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR
GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSMPEPRRSAPRSSRPRDN
SSRFDD

Sequences:

>Translated_326_residues
MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE
SVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDEPYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAA
IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR
GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSMPEPRRSAPRSSRPRDN
SSRFDD
>Mature_326_residues
MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLDPILQFGVFLLAGTTMFFAYE
SVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDEPYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAA
IPEQAASRRRNKEEESWGEDSERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR
GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPPSSSMPEPRRSAPRSSRPRDN
SSRFDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010004 [H]

Pfam domain/function: PF07444 Ycf66_N [H]

EC number: NA

Molecular weight: Translated: 36588; Mature: 36588

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PILQFGVFLLAGTTMFFAYESVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDE
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAAIPEQAASRRRNKEEESWGED
HHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCH
SERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR
HHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC
GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPP
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSSMPEPRRSAPRSSRPRDNSSRFDD
CCCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVNASLNWGSIVGIVLAVGGALLYFMRSFKPALARDYDVFFAAIGLLCGGVFFFQGWRLD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PILQFGVFLLAGTTMFFAYESVRLRGVAVEGARRSSYFDDAPAPPINQGRGGGLRGDWDE
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PYDRFEEPQPVRRRFSSRDNDDADRPQEDLYRPRRTTRAAIPEQAASRRRNKEEESWGED
HHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCH
SERSRRMARFGRQDDEQNNRPDFGERRNIRQDQRRGSRPSANQQTTNRTQLSNEPRSTTR
HHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC
GGYGSSRKPGVPQGSQIRPEAEDAAYSPAKSRSTGSRPTASKPSRPQGNPSATRTEAAPP
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSSMPEPRRSAPRSSRPRDNSSRFDD
CCCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]