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The map label for this gene is ccdA

Identifier: 33863743

GI number: 33863743

Start: 1560802

End: 1561512

Strand: Direct

Name: ccdA

Synonym: PMT1476

Alternate gene names: NA

Gene position: 1560802-1561512 (Clockwise)

Preceding gene: 33863742

Following gene: 33863744

Centisome position: 64.74

GC content: 60.06

Gene sequence:

>711_bases
CTGGACCTGGTTCTCTCAGATCTAGCCCGCAACGGTGAGCAAATGCTCAGCCACGGGCTAAGCAATCAAGGTCCGCTCAC
CCTGGCCCTCGTTTTTGCTGCCGGCTTTCTAACCAGCCTAGGCCCCTGCTCCCTTTCCCTACTACCCGTCACCCTGGCCT
ATCTGGCAGGTTTTGATAGCAATCAGGCCCCCTGGCGCCGCAGCATCGCATTCTGTGGCGGCATTGTGGGTTCCCTGGTA
CTGCTTGGCAGTCTTAGTGGTCTGATCGGACGGATTTACGGCCAGGTACCTGGAGTGGTGCCCACCTTGGTAGCACTGCT
GGCGGTAGTCATGGGACTGAATCTGCTAGGCCTCCTAAAACTGCCCCTGCCTGCAGGACCAGATCCAGATCTTTGGCGGC
AACGCGTTCCAGCTCCACTTGCCCCAGTGGCCGCCGGGTTGGCCTTCGGCCTAGCCGCCTCCCCCTGTACGACACCTGTG
CTGGCTGTACTACTGGGATGGATCGCCCAGAGTGGTCAACCTTTGGTAGGAATCGTGCTACTCACCTGCTTTGGCATTGG
GCAGGTCCTACCACTGCTACTAGCAGGAAGCGCAGCTGCCATCCTGCCGAAATTACTGGCACTGCGACCATTAGGCCGCT
GGATCCCCCCCATGAGCGGAGCCGTTCTACTCACGACGGGCGTTCTCACTCTGTTGGCCCGCTGGAGCTGA

Upstream 100 bases:

>100_bases
AACAGGGCTCCTTGGTGGCAGATCCCCTAGACAGCGACGTCAGTCGATAGGGTAAATACCGTAATTTGATCCGGCTGAAC
CGGCTCTACCCATCCCTGCT

Downstream 100 bases:

>100_bases
ACCTATGGCCACCTTTAAACGCCTTCTTGCCTGGATCTCCGACCTACGAATAGCCATAGGTTTGCTACTCGTTATCGCAC
TCGCAAGTGCCCTAGGTACT

Product: c-type cytochrome biogenesis protein CcdA

Products: NA

Alternate protein names: Cytochrome C Biogenesis Protein; Cytochrome C Biogenesis Protein-Like; CytoChrome C Biogenesis Protein; C-Type Cytochrome Biogenesis Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDLVLSDLARNGEQMLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGGIVGSLV
LLGSLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPV
LAVLLGWIAQSGQPLVGIVLLTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS

Sequences:

>Translated_236_residues
MDLVLSDLARNGEQMLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGGIVGSLV
LLGSLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPV
LAVLLGWIAQSGQPLVGIVLLTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS
>Mature_236_residues
MDLVLSDLARNGEQMLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDSNQAPWRRSIAFCGGIVGSLV
LLGSLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLKLPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPV
LAVLLGWIAQSGQPLVGIVLLTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24153; Mature: 24153

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVLSDLARNGEQMLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDS
CCCHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
NQAPWRRSIAFCGGIVGSLVLLGSLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQSGQPLVGIVL
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
LTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLVLSDLARNGEQMLSHGLSNQGPLTLALVFAAGFLTSLGPCSLSLLPVTLAYLAGFDS
CCCHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
NQAPWRRSIAFCGGIVGSLVLLGSLSGLIGRIYGQVPGVVPTLVALLAVVMGLNLLGLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LPLPAGPDPDLWRQRVPAPLAPVAAGLAFGLAASPCTTPVLAVLLGWIAQSGQPLVGIVL
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
LTCFGIGQVLPLLLAGSAAAILPKLLALRPLGRWIPPMSGAVLLTTGVLTLLARWS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA