| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is thrA [H]
Identifier: 33863414
GI number: 33863414
Start: 1231938
End: 1233254
Strand: Direct
Name: thrA [H]
Synonym: PMT1143
Alternate gene names: 33863414
Gene position: 1231938-1233254 (Clockwise)
Preceding gene: 33863413
Following gene: 33863415
Centisome position: 51.1
GC content: 57.25
Gene sequence:
>1317_bases ATGGGCACGAAATTAGGAATAGGTCTCCTGGGGCTTGGAACAGTAGGCGCCGGTGTAGCAGGCATCCTCCAAGCCCCTGA AGGGCGGCATCCACTGGTGGCTGAGCTTGAACTGGTCCGTGTAGCGGTTCGAGATCTACAACGACCTCGCCCAATTGAGC TCCGCCCATCCTTAGTGACCAACAACCCACAGGCCGTTGTTGATGATCCCTCTGTTCAAGTGGTTGTTGAAGTCATGGGA GGGATCGAACCAGCCCGAACCCTGATCATGCGAGCCATTGCCGCCGGCAAAGCGGTCGTTACAGCTAACAAAGCGGTGAT TGCAAGACATGGCGAAGAGATTGCCTCTGCTGCTGCAGCTGCTGGGGTCTACGTCCTGATCGAAGCTGCCGTCGGCGGTG GCATCCCGATCATCGAGCCACTTAAGCAATCACTAGGTGGCAACCGGATCGAACGCGTGAGCGGCATCATCAACGGCACC ACCAACTACATCCTCAGCCGCATGGCACAGGAAGGGGTGGCCTATGACGACGTGCTCAAGACCGCCCAAGATCTTGGCTA CGCAGAGGCAGATCCAGCTGCCGACGTTGAGGGGTTCGATGCGGCCGACAAGATTGCCATCCTCACTGGGCTCGCCTTCG GTGGACCTGTCGACCGTGACTCAATTCCCACCCAAGGCATCAACAACCTTCAAAGCCGCGATGTGGACTACGCCACACAG CTTGGCTACAGGGTGAAACTATTGGCTATCGCCGAACGTCTCAACTCAGACGCTCAGACCAGTCAGTCCTTGCCCTTAGC GGTAAGGGTGCAGCCAACCATGATTCCTCTCGACCACCCGCTTGCTGGCGTGAATGGCGTGAACAACGCCATCCTGGTTG AGGGCGATCCGATCGGCCGCGTGATGTTTTATGGCCCAGGAGCAGGCTCTGGACCCACCGCCTCAGCTGTGGTGGCGGAC ATCCTCAACATCGCTGGCATACGCCAATTAGGTGAAATCAACGGCAGCCTCGACCCCCTTCTTGCCGCAAGCAGTTGGCG TTCCTGTCACCTCGTTGATCCAAGCGCCATCCTTCAGCGCAACTATGTGCGCTTCAACGCAGAAGACACCCCAGGAGTGA TCGGTCGGATCGGTAGCTGCTTCGGCGATCGTGGCATCTCGATTCAATCAATCGTTCAATTCGATGCCTCCGATGCCGGC GCCGAAATCGTTGTGATTACCCATGAAATAAGTCAAGGCCAGATGCAAGATGCCCTGACCGCAATCACCTCCATGGCTGA GGTCAAAGGACTTGCCGCCCATCTGAGCTGTCTTTAA
Upstream 100 bases:
>100_bases CTCCTCAATATGAAGGCCCAGGCCCAGCAACTTGCCAGGGTTTCGTCTTCAACAACTTCTTAGAGTCCGGCCAGCAATTA AACGACTGGACGCAGTTGCC
Downstream 100 bases:
>100_bases CTTCCAGCCTCCCCCTGACGAAGAGCCCCCTACTTACTTAAGAGTTATAAAACAAGTTGAGAGGCAAGTCTGCAGACGCT GACCTGTGCCCCCAAAGGTT
Product: homoserine dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MGTKLGIGLLGLGTVGAGVAGILQAPEGRHPLVAELELVRVAVRDLQRPRPIELRPSLVTNNPQAVVDDPSVQVVVEVMG GIEPARTLIMRAIAAGKAVVTANKAVIARHGEEIASAAAAAGVYVLIEAAVGGGIPIIEPLKQSLGGNRIERVSGIINGT TNYILSRMAQEGVAYDDVLKTAQDLGYAEADPAADVEGFDAADKIAILTGLAFGGPVDRDSIPTQGINNLQSRDVDYATQ LGYRVKLLAIAERLNSDAQTSQSLPLAVRVQPTMIPLDHPLAGVNGVNNAILVEGDPIGRVMFYGPGAGSGPTASAVVAD ILNIAGIRQLGEINGSLDPLLAASSWRSCHLVDPSAILQRNYVRFNAEDTPGVIGRIGSCFGDRGISIQSIVQFDASDAG AEIVVITHEISQGQMQDALTAITSMAEVKGLAAHLSCL
Sequences:
>Translated_438_residues MGTKLGIGLLGLGTVGAGVAGILQAPEGRHPLVAELELVRVAVRDLQRPRPIELRPSLVTNNPQAVVDDPSVQVVVEVMG GIEPARTLIMRAIAAGKAVVTANKAVIARHGEEIASAAAAAGVYVLIEAAVGGGIPIIEPLKQSLGGNRIERVSGIINGT TNYILSRMAQEGVAYDDVLKTAQDLGYAEADPAADVEGFDAADKIAILTGLAFGGPVDRDSIPTQGINNLQSRDVDYATQ LGYRVKLLAIAERLNSDAQTSQSLPLAVRVQPTMIPLDHPLAGVNGVNNAILVEGDPIGRVMFYGPGAGSGPTASAVVAD ILNIAGIRQLGEINGSLDPLLAASSWRSCHLVDPSAILQRNYVRFNAEDTPGVIGRIGSCFGDRGISIQSIVQFDASDAG AEIVVITHEISQGQMQDALTAITSMAEVKGLAAHLSCL >Mature_437_residues GTKLGIGLLGLGTVGAGVAGILQAPEGRHPLVAELELVRVAVRDLQRPRPIELRPSLVTNNPQAVVDDPSVQVVVEVMGG IEPARTLIMRAIAAGKAVVTANKAVIARHGEEIASAAAAAGVYVLIEAAVGGGIPIIEPLKQSLGGNRIERVSGIINGTT NYILSRMAQEGVAYDDVLKTAQDLGYAEADPAADVEGFDAADKIAILTGLAFGGPVDRDSIPTQGINNLQSRDVDYATQL GYRVKLLAIAERLNSDAQTSQSLPLAVRVQPTMIPLDHPLAGVNGVNNAILVEGDPIGRVMFYGPGAGSGPTASAVVADI LNIAGIRQLGEINGSLDPLLAASSWRSCHLVDPSAILQRNYVRFNAEDTPGVIGRIGSCFGDRGISIQSIVQFDASDAGA EIVVITHEISQGQMQDALTAITSMAEVKGLAAHLSCL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0460
COG function: function code E; Homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=117, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790376, Length=260, Percent_Identity=25, Blast_Score=62, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322599, Length=193, Percent_Identity=29.0155440414508, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005106 - InterPro: IPR016204 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =1.1.1.3 [H]
Molecular weight: Translated: 45450; Mature: 45318
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS01042 HOMOSER_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKLGIGLLGLGTVGAGVAGILQAPEGRHPLVAELELVRVAVRDLQRPRPIELRPSLVT CCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEC NNPQAVVDDPSVQVVVEVMGGIEPARTLIMRAIAAGKAVVTANKAVIARHGEEIASAAAA CCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHH AGVYVLIEAAVGGGIPIIEPLKQSLGGNRIERVSGIINGTTNYILSRMAQEGVAYDDVLK CCEEEEEEEHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH TAQDLGYAEADPAADVEGFDAADKIAILTGLAFGGPVDRDSIPTQGINNLQSRDVDYATQ HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHH LGYRVKLLAIAERLNSDAQTSQSLPLAVRVQPTMIPLDHPLAGVNGVNNAILVEGDPIGR CCCHHHHHHHHHHHCCCHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCE VMFYGPGAGSGPTASAVVADILNIAGIRQLGEINGSLDPLLAASSWRSCHLVDPSAILQR EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECHHHHHHC NYVRFNAEDTPGVIGRIGSCFGDRGISIQSIVQFDASDAGAEIVVITHEISQGQMQDALT CCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHEECCCCCCCEEEEEEECCCCHHHHHHHH AITSMAEVKGLAAHLSCL HHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTKLGIGLLGLGTVGAGVAGILQAPEGRHPLVAELELVRVAVRDLQRPRPIELRPSLVT CCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEC NNPQAVVDDPSVQVVVEVMGGIEPARTLIMRAIAAGKAVVTANKAVIARHGEEIASAAAA CCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHH AGVYVLIEAAVGGGIPIIEPLKQSLGGNRIERVSGIINGTTNYILSRMAQEGVAYDDVLK CCEEEEEEEHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH TAQDLGYAEADPAADVEGFDAADKIAILTGLAFGGPVDRDSIPTQGINNLQSRDVDYATQ HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHH LGYRVKLLAIAERLNSDAQTSQSLPLAVRVQPTMIPLDHPLAGVNGVNNAILVEGDPIGR CCCHHHHHHHHHHHCCCHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCEEEEECCCCCE VMFYGPGAGSGPTASAVVADILNIAGIRQLGEINGSLDPLLAASSWRSCHLVDPSAILQR EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECHHHHHHC NYVRFNAEDTPGVIGRIGSCFGDRGISIQSIVQFDASDAGAEIVVITHEISQGQMQDALT CCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHEECCCCCCCEEEEEEECCCCHHHHHHHH AITSMAEVKGLAAHLSCL HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]