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The map label for this gene is ygdK [C]

Identifier: 33863413

GI number: 33863413

Start: 1231439

End: 1231900

Strand: Direct

Name: ygdK [C]

Synonym: PMT1142

Alternate gene names: 33863413

Gene position: 1231439-1231900 (Clockwise)

Preceding gene: 33863412

Following gene: 33863414

Centisome position: 51.08

GC content: 54.33

Gene sequence:

>462_bases
ATGGCTGAGCCCACCGCCGCACCTTCAAGCTTTGGCAGTGAAGCCCTTGACAGCATGGTCGAACGACTTAACGGCACCTC
TGATCCCCGCCGCCGCTACGAATATGTTCTATGGCTGGCCAAAAAGCTGCCACCAATGTCCCCGGAATTACAAACCGACG
CCATCAAGGTGAAGGGATGCGTTTCCCAGGTCCATGTGCTTGGTGAACTCGTGGAAGGACGGCTTCACTGGCAGGGAGAC
TCCGACGCGATGATTACACGAGGCTTGCTGGCAATGCTGATTCAAGGCCTCAACAATCTCACACCTGAGCAAGTCATGGC
CGTGGATCCAAGCTTCATTGAAGCCACAGGCCTTCAAGGCAGCCTTACCCCATCAAGAGCTAACGGATTCCTCAATATCC
TCCTCAATATGAAGGCCCAGGCCCAGCAACTTGCCAGGGTTTCGTCTTCAACAACTTCTTAG

Upstream 100 bases:

>100_bases
ACCATGGTTCCTCGCCAGCACTGGCTCGCCTCTCTTGCTTGGTCTTGCAGGTGTTTTGTTTAGCGTGAGTGAGCAGCGCC
TCAAATTCTGATCCTTCGCC

Downstream 100 bases:

>100_bases
AGTCCGGCCAGCAATTAAACGACTGGACGCAGTTGCCATGGGCACGAAATTAGGAATAGGTCTCCTGGGGCTTGGAACAG
TAGGCGCCGGTGTAGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAEPTAAPSSFGSEALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPELQTDAIKVKGCVSQVHVLGELVEGRLHWQGD
SDAMITRGLLAMLIQGLNNLTPEQVMAVDPSFIEATGLQGSLTPSRANGFLNILLNMKAQAQQLARVSSSTTS

Sequences:

>Translated_153_residues
MAEPTAAPSSFGSEALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPELQTDAIKVKGCVSQVHVLGELVEGRLHWQGD
SDAMITRGLLAMLIQGLNNLTPEQVMAVDPSFIEATGLQGSLTPSRANGFLNILLNMKAQAQQLARVSSSTTS
>Mature_152_residues
AEPTAAPSSFGSEALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPELQTDAIKVKGCVSQVHVLGELVEGRLHWQGDS
DAMITRGLLAMLIQGLNNLTPEQVMAVDPSFIEATGLQGSLTPSRANGFLNILLNMKAQAQQLARVSSSTTS

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1789176, Length=140, Percent_Identity=32.1428571428571, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI1787969, Length=102, Percent_Identity=35.2941176470588, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 16568; Mature: 16437

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPTAAPSSFGSEALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPELQTDAIKVKGC
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VSQVHVLGELVEGRLHWQGDSDAMITRGLLAMLIQGLNNLTPEQVMAVDPSFIEATGLQG
HHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHCCCCC
SLTPSRANGFLNILLNMKAQAQQLARVSSSTTS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AEPTAAPSSFGSEALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPELQTDAIKVKGC
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VSQVHVLGELVEGRLHWQGDSDAMITRGLLAMLIQGLNNLTPEQVMAVDPSFIEATGLQG
HHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHCCCCC
SLTPSRANGFLNILLNMKAQAQQLARVSSSTTS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]