Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863167

Identifier: 33863167

GI number: 33863167

Start: 975640

End: 976149

Strand: Reverse

Name: 33863167

Synonym: PMT0895

Alternate gene names: NA

Gene position: 976149-975640 (Counterclockwise)

Preceding gene: 33863168

Following gene: 33863166

Centisome position: 40.49

GC content: 51.76

Gene sequence:

>510_bases
ATGGATTCTTTACTTCAACGGCGCATCGCAGCAGTGCTCTTGTTTATTGCAGCTGCCATTGCCATCCTTTTGCCTTTTGC
CTCGGCCACCTTGCTAACCATTGCCCTCGGGGGGGCTGCCTGTGCCGCAGGCATTGGCCAATTATTGCGTCTTGGCGGTG
AAGCGGGCTTGCAGGGCAAAGTGTTTAGAGGCTTCAGTGGCGTGCTTTATATCGCAGCTGCTCTTTGGATTTTGATCGAC
CCGGTCGATAGTGAAATTAGCCTTACCTTGTTTGCAGGGGTCTTGCTTCTCATAGAAGGCTTGATGGAATTGGCTGGAGG
TGCAGCATCTCCAAGCCCTTTAGGTGGATTGGTGGTCTTCGATGGAGTGATCACTGCAATCTTCGGCCTCTTACTTGTTA
TTGAATGGCCATCAGACAGCATTTGGGCTCTGGGAACATTATTCGGGGCAGCATTGTTCCTATCTGCAATCAACCTGCTG
AGGGGCCCTAAGCCTGCTGAGACCACTTAG

Upstream 100 bases:

>100_bases
TGCTGCTTAACCTTCTGATCACTGGAGGGATGGAAGTTCTCAATCGGATTGTGATCAGATCCCAGCAATAGCCTTAAGCT
CAATTAGGTTTTTGTTTTTC

Downstream 100 bases:

>100_bases
CAAGTGGATCTCATTGGCGACATCATCAAATATCGCCAATGAGACCAGTCTCGATTAATAAGCTGAGATCTCAACATTCC
CATAGGGATGCATTGAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGKVFRGFSGVLYIAAALWILID
PVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVFDGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLL
RGPKPAETT

Sequences:

>Translated_169_residues
MDSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGKVFRGFSGVLYIAAALWILID
PVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVFDGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLL
RGPKPAETT
>Mature_169_residues
MDSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGKVFRGFSGVLYIAAALWILID
PVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVFDGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLL
RGPKPAETT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17242; Mature: 17242

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VFRGFSGVLYIAAALWILIDPVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
DGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLLRGPKPAETT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VFRGFSGVLYIAAALWILIDPVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
DGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLLRGPKPAETT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA