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The map label for this gene is nuc [H]

Identifier: 33863152

GI number: 33863152

Start: 964971

End: 965606

Strand: Direct

Name: nuc [H]

Synonym: PMT0880

Alternate gene names: 33863152

Gene position: 964971-965606 (Clockwise)

Preceding gene: 33863151

Following gene: 33863153

Centisome position: 40.03

GC content: 52.52

Gene sequence:

>636_bases
GTGCTTGGATCGGATATGGGCAAGGCACTTCTAGTTCTGCTTCTTACTCTTTGGGCAGTGCCTTCCAATGCAGCAGAAGT
GCTTGCGATCGGTGATGGCGACACTCTCACCGCCAAAGAAGGCAGTCAAACAATCAAGGTGCGCCTTGCCTGCATTGATG
CTCCAGAGACTTCCCAATCGCCCTATGGCAAAGCAGCACGACAAGCACTGAAGGGTCTATTGCCAGTCGGATCTGATGTG
TCCCTTCGCTCCAAGCCAACTGACCGCTATGGAAGAACCGTGGCAGAGGTCATTCGCAATGGCACCAACATCAATCAGTC
ATTAGTGAAGTCGGGCAATGCCTTTGTCTATTGGAAGTACATCAAAGGGTGTGATCGTCAGACCTACGCCCACCTAGAGA
CCTATGCCCGACTGGGAGGTATTGGGGTCTGGTCTGTTCCTGCTGGGATCCAGCGACCTTGGGATTACAGGCAAAGCAAG
CAGAGCGACAGCAAGGGAAAGCGTTATCGCTGCAAAGACATGAGTTCATGGAATGCAGCGCAAGAACTGCTCAGACAAAG
ACACTCCTGCCTGGATTGGGATAAGGACGGGGAAGCATGTGAGTCAATCAGGTGTGCAGGGCAGATTGCAACTTGA

Upstream 100 bases:

>100_bases
TGCTGGTTCTTTTCTACTGGGGTTTGATGATTTGGTGGATCAGGGGATCTAAGCGAAAGCAAGACCTTGCCAAACCGTTG
ACGGAGAAGGAGTTCGCTAA

Downstream 100 bases:

>100_bases
TGAAGGTTTCGTGACGACAGAAGCCTGATCGAGCATTGTCTGATCGGAGGTGCTTGGGCGATGCAACATCCCATTTGGGC
AACCCTTGCGTGGGCAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLGSDMGKALLVLLLTLWAVPSNAAEVLAIGDGDTLTAKEGSQTIKVRLACIDAPETSQSPYGKAARQALKGLLPVGSDV
SLRSKPTDRYGRTVAEVIRNGTNINQSLVKSGNAFVYWKYIKGCDRQTYAHLETYARLGGIGVWSVPAGIQRPWDYRQSK
QSDSKGKRYRCKDMSSWNAAQELLRQRHSCLDWDKDGEACESIRCAGQIAT

Sequences:

>Translated_211_residues
MLGSDMGKALLVLLLTLWAVPSNAAEVLAIGDGDTLTAKEGSQTIKVRLACIDAPETSQSPYGKAARQALKGLLPVGSDV
SLRSKPTDRYGRTVAEVIRNGTNINQSLVKSGNAFVYWKYIKGCDRQTYAHLETYARLGGIGVWSVPAGIQRPWDYRQSK
QSDSKGKRYRCKDMSSWNAAQELLRQRHSCLDWDKDGEACESIRCAGQIAT
>Mature_211_residues
MLGSDMGKALLVLLLTLWAVPSNAAEVLAIGDGDTLTAKEGSQTIKVRLACIDAPETSQSPYGKAARQALKGLLPVGSDV
SLRSKPTDRYGRTVAEVIRNGTNINQSLVKSGNAFVYWKYIKGCDRQTYAHLETYARLGGIGVWSVPAGIQRPWDYRQSK
QSDSKGKRYRCKDMSSWNAAQELLRQRHSCLDWDKDGEACESIRCAGQIAT

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: =3.1.31.1 [H]

Molecular weight: Translated: 23156; Mature: 23156

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSDMGKALLVLLLTLWAVPSNAAEVLAIGDGDTLTAKEGSQTIKVRLACIDAPETSQS
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCEEEEEEEEECCCCCCCC
PYGKAARQALKGLLPVGSDVSLRSKPTDRYGRTVAEVIRNGTNINQSLVKSGNAFVYWKY
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEHH
IKGCDRQTYAHLETYARLGGIGVWSVPAGIQRPWDYRQSKQSDSKGKRYRCKDMSSWNAA
HCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCHHHH
QELLRQRHSCLDWDKDGEACESIRCAGQIAT
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MLGSDMGKALLVLLLTLWAVPSNAAEVLAIGDGDTLTAKEGSQTIKVRLACIDAPETSQS
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCEEEEEEEEECCCCCCCC
PYGKAARQALKGLLPVGSDVSLRSKPTDRYGRTVAEVIRNGTNINQSLVKSGNAFVYWKY
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEHH
IKGCDRQTYAHLETYARLGGIGVWSVPAGIQRPWDYRQSKQSDSKGKRYRCKDMSSWNAA
HCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCHHHH
QELLRQRHSCLDWDKDGEACESIRCAGQIAT
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1560781 [H]