Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863153

Identifier: 33863153

GI number: 33863153

Start: 965961

End: 966395

Strand: Direct

Name: 33863153

Synonym: PMT0881

Alternate gene names: NA

Gene position: 965961-966395 (Clockwise)

Preceding gene: 33863152

Following gene: 33863157

Centisome position: 40.07

GC content: 42.3

Gene sequence:

>435_bases
TTGCTCCACTTCTATTCGTTAGCCTCTCTAACCACACAGGAAATCCCGAAGCATCAATTATCAGTAGACAGGCTAGACCC
AGGACAACCATGGGAATGCCTAGCGCTAGCAATAAATCCATGCGTTTACCTCATTGACCCTAATCATATCCTTTATATCG
TGAAAGCAAGTATTTTTGTCAAGACTAAGAAAAAGTCTGTAGTTTCTTTGGCCAACTTGGCTTTATGGATTGATATTACT
TTTCCGCCAGCCTGGCATGAAACCCCTCTTTTAGGGGAAACAGCAAGATCAAAAAACCTCCTTCTTGGTGATGTTGCTGC
AGGTTGGTTGCGCGATAGTGTGTTTGTCTGTGTCGAGAGCCTCACAATCAAAACCTCTAATATGAATTTTAGTTCAATCG
AAGTCAACTATCTAAAGGCTCCGCAGTTGCATTAG

Upstream 100 bases:

>100_bases
TAAATGATTTCAATTAAAAAGTTATGAACCTATAGTTAATTACTACTGGCGTATCTAACTATGGAAACAACCGCAATGAT
GATTACACCATAGGTCCAGA

Downstream 100 bases:

>100_bases
CATTCATTCATGTGGCGAAGGTGAAAACCTGAAGATCATCAACCAACAATGAAACTCTTTTCTTAAATCTCTATTGCTGC
CGTTCTCGGATCATTGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLHFYSLASLTTQEIPKHQLSVDRLDPGQPWECLALAINPCVYLIDPNHILYIVKASIFVKTKKKSVVSLANLALWIDIT
FPPAWHETPLLGETARSKNLLLGDVAAGWLRDSVFVCVESLTIKTSNMNFSSIEVNYLKAPQLH

Sequences:

>Translated_144_residues
MLHFYSLASLTTQEIPKHQLSVDRLDPGQPWECLALAINPCVYLIDPNHILYIVKASIFVKTKKKSVVSLANLALWIDIT
FPPAWHETPLLGETARSKNLLLGDVAAGWLRDSVFVCVESLTIKTSNMNFSSIEVNYLKAPQLH
>Mature_144_residues
MLHFYSLASLTTQEIPKHQLSVDRLDPGQPWECLALAINPCVYLIDPNHILYIVKASIFVKTKKKSVVSLANLALWIDIT
FPPAWHETPLLGETARSKNLLLGDVAAGWLRDSVFVCVESLTIKTSNMNFSSIEVNYLKAPQLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16144; Mature: 16144

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHFYSLASLTTQEIPKHQLSVDRLDPGQPWECLALAINPCVYLIDPNHILYIVKASIFV
CEEEEEHHHHHHHHCCCCCCEECCCCCCCCHHEEEEEECCEEEEECCCEEEEEEEEEEEE
KTKKKSVVSLANLALWIDITFPPAWHETPLLGETARSKNLLLGDVAAGWLRDSVFVCVES
EECCHHHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEEEE
LTIKTSNMNFSSIEVNYLKAPQLH
EEEEECCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MLHFYSLASLTTQEIPKHQLSVDRLDPGQPWECLALAINPCVYLIDPNHILYIVKASIFV
CEEEEEHHHHHHHHCCCCCCEECCCCCCCCHHEEEEEECCEEEEECCCEEEEEEEEEEEE
KTKKKSVVSLANLALWIDITFPPAWHETPLLGETARSKNLLLGDVAAGWLRDSVFVCVES
EECCHHHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHEEEEEE
LTIKTSNMNFSSIEVNYLKAPQLH
EEEEECCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA