| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863151
Identifier: 33863151
GI number: 33863151
Start: 964511
End: 964834
Strand: Direct
Name: 33863151
Synonym: PMT0879
Alternate gene names: NA
Gene position: 964511-964834 (Clockwise)
Preceding gene: 33863150
Following gene: 33863152
Centisome position: 40.01
GC content: 44.44
Gene sequence:
>324_bases ATGTTGATGATGATTCCTATGACGAAGTTGATGAGTACCTCATCAGCCAAGAATCTGATGAGGGAGAACGTGCTTACTTT CCAGTTGAAGGCTCAAAACCGCCTCACTACTGAGATCTTTGTCTTGGAAAAGATCAATAAGAACTTGAGATCTCAATTGC CTTCAGTAACCTTTGATCGATGGCAGGTGACAACTAAAGAGGTTTGTGCCAAGGCATATGCACCCTATAAGCAAGGCAGT ATTTACTTGCAGATGATCATTCGCTGCGATGACAGCCTCAACCTTGCCCTACGCCAGGCACTAAAAGGACTGGAAGAGAA CTGA
Upstream 100 bases:
>100_bases TGACCTACGCTTCTTCCTCCTATCACCATGAGATGTGATCAGGCAAAATTGAATTAGATGAGATCAAATGGAGGTTTAGG CGTGACTGTTCACGAAAGAG
Downstream 100 bases:
>100_bases TGGAGCGCTTGCACTGGAGTTATCTAGAAGTTGGTTTGCTGGTTCTTTTCTACTGGGGTTTGATGATTTGGTGGATCAGG GGATCTAAGCGAAAGCAAGA
Product: chromatin organization protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MLMMIPMTKLMSTSSAKNLMRENVLTFQLKAQNRLTTEIFVLEKINKNLRSQLPSVTFDRWQVTTKEVCAKAYAPYKQGS IYLQMIIRCDDSLNLALRQALKGLEEN
Sequences:
>Translated_107_residues MLMMIPMTKLMSTSSAKNLMRENVLTFQLKAQNRLTTEIFVLEKINKNLRSQLPSVTFDRWQVTTKEVCAKAYAPYKQGS IYLQMIIRCDDSLNLALRQALKGLEEN >Mature_107_residues MLMMIPMTKLMSTSSAKNLMRENVLTFQLKAQNRLTTEIFVLEKINKNLRSQLPSVTFDRWQVTTKEVCAKAYAPYKQGS IYLQMIIRCDDSLNLALRQALKGLEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12360; Mature: 12360
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMMIPMTKLMSTSSAKNLMRENVLTFQLKAQNRLTTEIFVLEKINKNLRSQLPSVTFDR CEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHH WQVTTKEVCAKAYAPYKQGSIYLQMIIRCDDSLNLALRQALKGLEEN HCCCHHHHHHHHCCCCCCCCEEEHHEECCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MLMMIPMTKLMSTSSAKNLMRENVLTFQLKAQNRLTTEIFVLEKINKNLRSQLPSVTFDR CEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHH WQVTTKEVCAKAYAPYKQGSIYLQMIIRCDDSLNLALRQALKGLEEN HCCCHHHHHHHHCCCCCCCCEEEHHEECCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA