| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863115
Identifier: 33863115
GI number: 33863115
Start: 918450
End: 919028
Strand: Reverse
Name: 33863115
Synonym: PMT0843
Alternate gene names: NA
Gene position: 919028-918450 (Counterclockwise)
Preceding gene: 33863116
Following gene: 33863114
Centisome position: 38.12
GC content: 52.5
Gene sequence:
>579_bases GTGGCTCAACTCCAGCCCACCCAGTGGTGCGTGGGCTTAGCGGAAGTGAAGAGTCGTCAGCTCGATTTCCGTGGACAAAG CCCTAATGATCAAAAAAAATATTTGAAAGGTAAGCCCGTTCCCCTTGTAGGCAACGGTTCAGGTTCACTGTGGATGATTG ATCGTCATCACCGCCTACGAGCACTATTGGATCTTGACCAAGACGCCACCACCTATGGATATCTGATCGAAAATTGTCCT ACTGAGGATGATTTAGAGAGCCTTCAGCTTTTGGCCGACCGTGGTTGGTTGTATCTCTACAACGGCCGAGGCCATGGCCC CCTATTGCCGCAGGGTTTACCTAAGAGCTTGTTAATGCTTGAGGACGACCCCTACCGAAGCCTTGCTTGGAAGCTCAAAA GTGAAGGGCTGATACGTCCAGAACCATTGATCCCATATCACGAATTCCGCTGGGGAACCTGGCTGCGCAGCCGTGCGTTA CCGCCTTTTTCTAGTAAGTACCTTGAACCGGCATTGCCGGCTGCTCGCAGTTTGGTGCGTTCCAATGCTGCCTCCCACCT GGATGGCTGGATTGGGTGA
Upstream 100 bases:
>100_bases TCAGGATGATGGCACCTGCCATAGGTGTTTGTCCTTTCATCTGCCCAGCTATAAGCGGATCCCCGGTGCTGATGAAGGCT TTGAGCTTTTTGAGGTTTCC
Downstream 100 bases:
>100_bases TTTCACCTTTCATCAGACGAAAGTCATGCAGAAGACGGAAGTCGTCTACTAGACCATTAGCTTCTTGAGTGGCTCAGTTT TTCTGTTTGCCTGAACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAQLQPTQWCVGLAEVKSRQLDFRGQSPNDQKKYLKGKPVPLVGNGSGSLWMIDRHHRLRALLDLDQDATTYGYLIENCP TEDDLESLQLLADRGWLYLYNGRGHGPLLPQGLPKSLLMLEDDPYRSLAWKLKSEGLIRPEPLIPYHEFRWGTWLRSRAL PPFSSKYLEPALPAARSLVRSNAASHLDGWIG
Sequences:
>Translated_192_residues MAQLQPTQWCVGLAEVKSRQLDFRGQSPNDQKKYLKGKPVPLVGNGSGSLWMIDRHHRLRALLDLDQDATTYGYLIENCP TEDDLESLQLLADRGWLYLYNGRGHGPLLPQGLPKSLLMLEDDPYRSLAWKLKSEGLIRPEPLIPYHEFRWGTWLRSRAL PPFSSKYLEPALPAARSLVRSNAASHLDGWIG >Mature_191_residues AQLQPTQWCVGLAEVKSRQLDFRGQSPNDQKKYLKGKPVPLVGNGSGSLWMIDRHHRLRALLDLDQDATTYGYLIENCPT EDDLESLQLLADRGWLYLYNGRGHGPLLPQGLPKSLLMLEDDPYRSLAWKLKSEGLIRPEPLIPYHEFRWGTWLRSRALP PFSSKYLEPALPAARSLVRSNAASHLDGWIG
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21801; Mature: 21670
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLQPTQWCVGLAEVKSRQLDFRGQSPNDQKKYLKGKPVPLVGNGSGSLWMIDRHHRLR CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEECCHHHH ALLDLDQDATTYGYLIENCPTEDDLESLQLLADRGWLYLYNGRGHGPLLPQGLPKSLLML HHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEE EDDPYRSLAWKLKSEGLIRPEPLIPYHEFRWGTWLRSRALPPFSSKYLEPALPAARSLVR CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHH SNAASHLDGWIG HHHHHHHCCCCC >Mature Secondary Structure AQLQPTQWCVGLAEVKSRQLDFRGQSPNDQKKYLKGKPVPLVGNGSGSLWMIDRHHRLR CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEECCCCCEEEEECCHHHH ALLDLDQDATTYGYLIENCPTEDDLESLQLLADRGWLYLYNGRGHGPLLPQGLPKSLLML HHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEE EDDPYRSLAWKLKSEGLIRPEPLIPYHEFRWGTWLRSRALPPFSSKYLEPALPAARSLVR CCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHH SNAASHLDGWIG HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA