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The map label for this gene is 33863114

Identifier: 33863114

GI number: 33863114

Start: 916948

End: 917598

Strand: Reverse

Name: 33863114

Synonym: PMT0842

Alternate gene names: NA

Gene position: 917598-916948 (Counterclockwise)

Preceding gene: 33863115

Following gene: 33863113

Centisome position: 38.06

GC content: 40.4

Gene sequence:

>651_bases
TTGCCGCTCTATTGCTGTGCACTCCCATTCACGCGATGGGGTGTTCTGGAGATCACTTTCTCAAGCACGACGGTGTTTCA
ACAGAGAAGACGTCTGAGTCGACTGACACCACCACCAAGACAAGCATCGATGCTTCTAAGGCCAAAGTTTCAGAGAGCTC
GAATAACTGAACCCTTTTCAAATAAGATCTTTTGTATGACAAGAATAAATTTGGTCAAGCCAAGTGAATTATCTGATCAA
CATTTAGTTGCGGAATATAGAGAAATTTTTATGGTTGGCTCCGCACTCCAACGCTCATTAAAGTCAAAAAACTGGCAGAG
AACCAAAGAACAGCTACCCAAAGAATTCACCTTAAATATTGGTCACGTTAAGTTCTTCTACAACAAAGGTAAGTATTTGC
ATAAAAGATATTTAGACCTGATCAAGGAAATGAAATGCAGAGGTATGCGTCCAGATCCAGAACGTCAATTCAAAAAAGAG
CAGTGGCCAAGTGACCTTTATAAAGACTGGGAGCCTAATGCAAAAGACATTGAGCTAATAAGAAAAAGAATCAAAGAAAA
AATCAATCAAAAGCCCACTTGGTATCGCTGGACAAAAAACCAAGATGGTGATTCACCAGGGAATACGTCTGAGTCTGGGT
TTTTGCTTTAG

Upstream 100 bases:

>100_bases
TCAACAGTCCCTTGGAGGGCTCTTAGTCACTTCAGTCATTGATTGAGTAGAAAAGTGGTACTGACAATCAACAGAATGAT
CTTTCCTCTAGCTACCGTGT

Downstream 100 bases:

>100_bases
AAGATAGGTGCTGATTCGCGGATCTCGATGCCGGGATCTGCGTGGTGTCAGCGTATGGGTCTAGGCTTCAGTACCTCAAC
CACAGGCAGCCTAGTGGCAG

Product: pyrimidine dimer DNA glycosylase

Products: NA

Alternate protein names: Deoxyribonuclease; Pyrimidine Dimer DNA Glycosylase/Endonuclease V; Endonuclease V

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPLYCCALPFTRWGVLEITFSSTTVFQQRRRLSRLTPPPRQASMLLRPKFQRARITEPFSNKIFCMTRINLVKPSELSDQ
HLVAEYREIFMVGSALQRSLKSKNWQRTKEQLPKEFTLNIGHVKFFYNKGKYLHKRYLDLIKEMKCRGMRPDPERQFKKE
QWPSDLYKDWEPNAKDIELIRKRIKEKINQKPTWYRWTKNQDGDSPGNTSESGFLL

Sequences:

>Translated_216_residues
MPLYCCALPFTRWGVLEITFSSTTVFQQRRRLSRLTPPPRQASMLLRPKFQRARITEPFSNKIFCMTRINLVKPSELSDQ
HLVAEYREIFMVGSALQRSLKSKNWQRTKEQLPKEFTLNIGHVKFFYNKGKYLHKRYLDLIKEMKCRGMRPDPERQFKKE
QWPSDLYKDWEPNAKDIELIRKRIKEKINQKPTWYRWTKNQDGDSPGNTSESGFLL
>Mature_215_residues
PLYCCALPFTRWGVLEITFSSTTVFQQRRRLSRLTPPPRQASMLLRPKFQRARITEPFSNKIFCMTRINLVKPSELSDQH
LVAEYREIFMVGSALQRSLKSKNWQRTKEQLPKEFTLNIGHVKFFYNKGKYLHKRYLDLIKEMKCRGMRPDPERQFKKEQ
WPSDLYKDWEPNAKDIELIRKRIKEKINQKPTWYRWTKNQDGDSPGNTSESGFLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25879; Mature: 25748

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYCCALPFTRWGVLEITFSSTTVFQQRRRLSRLTPPPRQASMLLRPKFQRARITEPFS
CCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCCCC
NKIFCMTRINLVKPSELSDQHLVAEYREIFMVGSALQRSLKSKNWQRTKEQLPKEFTLNI
CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHEEEC
GHVKFFYNKGKYLHKRYLDLIKEMKCRGMRPDPERQFKKEQWPSDLYKDWEPNAKDIELI
CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHH
RKRIKEKINQKPTWYRWTKNQDGDSPGNTSESGFLL
HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLYCCALPFTRWGVLEITFSSTTVFQQRRRLSRLTPPPRQASMLLRPKFQRARITEPFS
CEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCCCC
NKIFCMTRINLVKPSELSDQHLVAEYREIFMVGSALQRSLKSKNWQRTKEQLPKEFTLNI
CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHEEEC
GHVKFFYNKGKYLHKRYLDLIKEMKCRGMRPDPERQFKKEQWPSDLYKDWEPNAKDIELI
CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHH
RKRIKEKINQKPTWYRWTKNQDGDSPGNTSESGFLL
HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA