| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863116
Identifier: 33863116
GI number: 33863116
Start: 919464
End: 919919
Strand: Reverse
Name: 33863116
Synonym: PMT0844
Alternate gene names: NA
Gene position: 919919-919464 (Counterclockwise)
Preceding gene: 33863117
Following gene: 33863115
Centisome position: 38.16
GC content: 46.71
Gene sequence:
>456_bases ATGCAAAATTGTGGAGTCTGTGAACACCATCGCAGCGCTAGTGATCAATTTAACTATGAAATTGTTCGCACAACTCATTG GGTTTTTCGCCATCATCCAGCACCAGCTCCTTTGCTTGGTTGGCTACTGCTCGATTCACGTCGTCACTTGGCAGGACCTA TTGATTTCCTACCCGATGAAACAGCATCTTGGGGGAAGGCAATGCAAATTGGTAGTGGGCTTGTACAACGGCTTACCAAG TGCGACAGGGTTTATACCATTGCTTTTGGAGAAGGAGCTCATCATTTGCATTTGCATCTGATCCCACGATTCCAGCTTGA TCTTCATACCACTGCTTGGGCCGTAGCCGATCATTACCGTGCAGTCAGTAATGGGCAGCGAGCAGCAGTTGATTCAATCC AGATTGCTGAATTTGTCAAACAAGCTCGACTTCTTGCAAAATCATTCGAGCTCTAG
Upstream 100 bases:
>100_bases ATTTCTTTAGTGCATAAACAACTGTTATCATGCTTTGTTTGATCTCATCCGCCTTCGATTTGAACTTGTTTTATTTAAAA TATAGTATTTGATTCTACTT
Downstream 100 bases:
>100_bases GCTTGATCTTAAAAGTGACAATTAGGCTTCTCTTTGGATAGTGGCCTTTTCAGCTGAAAGAACTTTTTAACCATTGTTAA TATTCTGTATCTCTATTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MQNCGVCEHHRSASDQFNYEIVRTTHWVFRHHPAPAPLLGWLLLDSRRHLAGPIDFLPDETASWGKAMQIGSGLVQRLTK CDRVYTIAFGEGAHHLHLHLIPRFQLDLHTTAWAVADHYRAVSNGQRAAVDSIQIAEFVKQARLLAKSFEL
Sequences:
>Translated_151_residues MQNCGVCEHHRSASDQFNYEIVRTTHWVFRHHPAPAPLLGWLLLDSRRHLAGPIDFLPDETASWGKAMQIGSGLVQRLTK CDRVYTIAFGEGAHHLHLHLIPRFQLDLHTTAWAVADHYRAVSNGQRAAVDSIQIAEFVKQARLLAKSFEL >Mature_151_residues MQNCGVCEHHRSASDQFNYEIVRTTHWVFRHHPAPAPLLGWLLLDSRRHLAGPIDFLPDETASWGKAMQIGSGLVQRLTK CDRVYTIAFGEGAHHLHLHLIPRFQLDLHTTAWAVADHYRAVSNGQRAAVDSIQIAEFVKQARLLAKSFEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17111; Mature: 17111
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNCGVCEHHRSASDQFNYEIVRTTHWVFRHHPAPAPLLGWLLLDSRRHLAGPIDFLPDE CCCCCCCCCCCCCCCCCCEEEEEEEEEEHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC TASWGKAMQIGSGLVQRLTKCDRVYTIAFGEGAHHLHLHLIPRFQLDLHTTAWAVADHYR CCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEECCEEEEECHHHHHHHHHHH AVSNGQRAAVDSIQIAEFVKQARLLAKSFEL HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQNCGVCEHHRSASDQFNYEIVRTTHWVFRHHPAPAPLLGWLLLDSRRHLAGPIDFLPDE CCCCCCCCCCCCCCCCCCEEEEEEEEEEHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC TASWGKAMQIGSGLVQRLTKCDRVYTIAFGEGAHHLHLHLIPRFQLDLHTTAWAVADHYR CCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEECCEEEEECHHHHHHHHHHH AVSNGQRAAVDSIQIAEFVKQARLLAKSFEL HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA