| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863109
Identifier: 33863109
GI number: 33863109
Start: 913690
End: 914133
Strand: Reverse
Name: 33863109
Synonym: PMT0837
Alternate gene names: NA
Gene position: 914133-913690 (Counterclockwise)
Preceding gene: 33863111
Following gene: 33863107
Centisome position: 37.92
GC content: 51.35
Gene sequence:
>444_bases TTGAAGAAGGTTGTTGCTTCAGCCACTCCCATAGCCAGCCAGCTCATCGCCAAGGATTTCCCCGCTCTACCCAAGACCTT CTTCTGCCTTCCTGCCGAGATGGTGGGACCTGAATTGGTGGGCTGCCGTTTGGTCAAACGCCAAGCAGATGGACGTTTGC TCTGGGGCGTGATTGTAGAAACGGAGGCGTATTCGCAGGATGAACCTTCCTGCCACGGCTATAGGCGCCGTTCACCGCAA AACGAAACCCTGTTTGGAGAATCAGGGCGGCTTTGCCAGAAGTATCGCCATCACAGTAAAGCTGCTACCAAGTGCCATTG GGGTAGTCGCATGCTTAAACGGCTAGTCATTCATTCAAGAACTAGAAGCAGGAAAAAAGAGGGTTTCTCCAGGTCAATTA CGAATACCGTTTGCGTTTTATATTCGCCTCAACCAAATCCCTGA
Upstream 100 bases:
>100_bases TGACTTTTTCGAGGAACGCTTTGAGTTGCTCTTCTGACATCTGAAAGAAGGGAATAGATAATTCAATTGTCTCTTCTGCA AGCAGCATTGTCAGCCTTGG
Downstream 100 bases:
>100_bases GGATTGGCATCAGGTTGCGGTGAGATTTAGCAAGACGAATGGAATCAGAGATGGAGATCAAACTCTCAGGCTGTGGTGAT TAAGTTAGGAATATAAGTAG
Product: DNA-3-methyladenine glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVETEAYSQDEPSCHGYRRRSPQ NETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSRTRSRKKEGFSRSITNTVCVLYSPQPNP
Sequences:
>Translated_147_residues MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVETEAYSQDEPSCHGYRRRSPQ NETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSRTRSRKKEGFSRSITNTVCVLYSPQPNP >Mature_147_residues MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVETEAYSQDEPSCHGYRRRSPQ NETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSRTRSRKKEGFSRSITNTVCVLYSPQPNP
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011034 - InterPro: IPR003180 [H]
Pfam domain/function: PF02245 Pur_DNA_glyco [H]
EC number: NA
Molecular weight: Translated: 16614; Mature: 16614
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVE CCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHCHHHHHHHHHHHCCCCEEEEEEEEE TEAYSQDEPSCHGYRRRSPQNETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSR CCCCCCCCCCCCCHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRSRKKEGFSRSITNTVCVLYSPQPNP HHHHHHHCHHHCCCCEEEEEECCCCCC >Mature Secondary Structure MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVE CCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHCHHHHHHHHHHHCCCCEEEEEEEEE TEAYSQDEPSCHGYRRRSPQNETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSR CCCCCCCCCCCCCHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRSRKKEGFSRSITNTVCVLYSPQPNP HHHHHHHCHHHCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA