Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863109

Identifier: 33863109

GI number: 33863109

Start: 913690

End: 914133

Strand: Reverse

Name: 33863109

Synonym: PMT0837

Alternate gene names: NA

Gene position: 914133-913690 (Counterclockwise)

Preceding gene: 33863111

Following gene: 33863107

Centisome position: 37.92

GC content: 51.35

Gene sequence:

>444_bases
TTGAAGAAGGTTGTTGCTTCAGCCACTCCCATAGCCAGCCAGCTCATCGCCAAGGATTTCCCCGCTCTACCCAAGACCTT
CTTCTGCCTTCCTGCCGAGATGGTGGGACCTGAATTGGTGGGCTGCCGTTTGGTCAAACGCCAAGCAGATGGACGTTTGC
TCTGGGGCGTGATTGTAGAAACGGAGGCGTATTCGCAGGATGAACCTTCCTGCCACGGCTATAGGCGCCGTTCACCGCAA
AACGAAACCCTGTTTGGAGAATCAGGGCGGCTTTGCCAGAAGTATCGCCATCACAGTAAAGCTGCTACCAAGTGCCATTG
GGGTAGTCGCATGCTTAAACGGCTAGTCATTCATTCAAGAACTAGAAGCAGGAAAAAAGAGGGTTTCTCCAGGTCAATTA
CGAATACCGTTTGCGTTTTATATTCGCCTCAACCAAATCCCTGA

Upstream 100 bases:

>100_bases
TGACTTTTTCGAGGAACGCTTTGAGTTGCTCTTCTGACATCTGAAAGAAGGGAATAGATAATTCAATTGTCTCTTCTGCA
AGCAGCATTGTCAGCCTTGG

Downstream 100 bases:

>100_bases
GGATTGGCATCAGGTTGCGGTGAGATTTAGCAAGACGAATGGAATCAGAGATGGAGATCAAACTCTCAGGCTGTGGTGAT
TAAGTTAGGAATATAAGTAG

Product: DNA-3-methyladenine glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVETEAYSQDEPSCHGYRRRSPQ
NETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSRTRSRKKEGFSRSITNTVCVLYSPQPNP

Sequences:

>Translated_147_residues
MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVETEAYSQDEPSCHGYRRRSPQ
NETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSRTRSRKKEGFSRSITNTVCVLYSPQPNP
>Mature_147_residues
MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVETEAYSQDEPSCHGYRRRSPQ
NETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSRTRSRKKEGFSRSITNTVCVLYSPQPNP

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011034
- InterPro:   IPR003180 [H]

Pfam domain/function: PF02245 Pur_DNA_glyco [H]

EC number: NA

Molecular weight: Translated: 16614; Mature: 16614

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVE
CCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHCHHHHHHHHHHHCCCCEEEEEEEEE
TEAYSQDEPSCHGYRRRSPQNETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSR
CCCCCCCCCCCCCHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRSRKKEGFSRSITNTVCVLYSPQPNP
HHHHHHHCHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKVVASATPIASQLIAKDFPALPKTFFCLPAEMVGPELVGCRLVKRQADGRLLWGVIVE
CCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHCHHHHHHHHHHHCCCCEEEEEEEEE
TEAYSQDEPSCHGYRRRSPQNETLFGESGRLCQKYRHHSKAATKCHWGSRMLKRLVIHSR
CCCCCCCCCCCCCHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRSRKKEGFSRSITNTVCVLYSPQPNP
HHHHHHHCHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA