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The map label for this gene is 33863107

Identifier: 33863107

GI number: 33863107

Start: 911165

End: 912097

Strand: Reverse

Name: 33863107

Synonym: PMT0835

Alternate gene names: NA

Gene position: 912097-911165 (Counterclockwise)

Preceding gene: 33863109

Following gene: 33863106

Centisome position: 37.83

GC content: 42.55

Gene sequence:

>933_bases
ATGCCTAGAACGCGCAGTATTCAAGACAAATCATGCTTAGCGAAAAATGCTGGGTGCGGAATTGCATGGCTCATAACGCA
AGGTCTGTCTGGCAGAGGCTCTAAGAATGGTTTTTGCGCCCCTAATGGCTACACCCTTACATCTGTTCTTATAACAGCCG
TAATCATGGGGATGATTACTGTTCCCTTGATGAAAATCTCCATGCAGGTAGGTCGTACTCAACGCAGATCACTCAATAGG
GAGAAAGCTCAATTTAATGCCTTGGTGATCTCTCAAGTAGGACGCAAAAGTAATGATATCTCTGAGGTTGAAGCGTTTGC
AAAACAGAAGGATTGCACGCTTGAGAGTGCTGATGGAGTCTATCTAGCAACTTGCACAGTAGGAGTTACTAGGCAAACGT
TAGGCACTGGTTCAAAAGCATTTGTTATGTGTGATTCATTATCTGATTCCAGCAAGCATCGTTTGAGCGAGTTAAGGAAA
AAAGTTAAGCCCGGCAGAGAAATCCTTGAAAGAGGTAATAGTTTTTATACCATCGTAGATGGACCCAGTTGGGTAGAAGC
CGAAGCCAATGCAGTGAAGTTAGGTGGTCACCTAGTAACGATCAATGATGAGGAAGAAAATAAATGGCTAGCAGAAAATT
TTGACTATATAGGTAAGTGGATTGGACTTACAGATTCGGCTCATGAGGGTGTATTCAAATGGGCAAGTGGAGCTTCAGTT
GATTTCACTAACTGGGCCGCTGATCAGCCAGATAATTACCATGGTATTCAGCATTATGCTATTTTTTCCGGTCATTGGAA
TTATAAAGGGATTAAATATGGCTGGGATGACCTACAGGATATGAAAAACGACGAAAATGTAAATCAAGGGATTGCCGAAA
TTCCCCGTAATTCAGCGTCTAGTGATAATCACGCGCAAAATTGTGAGGGATAG

Upstream 100 bases:

>100_bases
TTCCCAACAGCCAAGAAGCGAGTATTCCTATTTTCACGCAGTCATTGCTATATTAAGAAAACCTTAAGCCCAGGTGATTC
TTCTGCCTGGGTAGGCAGTT

Downstream 100 bases:

>100_bases
GATCTACAAAAGCCTGCAAAATTATTTCCATTAAAGGCCCCAGACCAAGTTCCAGAAACTAAAAGACCCCTGCTGGACAG
GGGTCTTATTTGGTGGCGGG

Product: C-type lectin domain-containing protein

Products: NA

Alternate protein names: C-Type Lectin; C-Type Lectin Domain Protein; YD Repeat-Containing Protein

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPRTRSIQDKSCLAKNAGCGIAWLITQGLSGRGSKNGFCAPNGYTLTSVLITAVIMGMITVPLMKISMQVGRTQRRSLNR
EKAQFNALVISQVGRKSNDISEVEAFAKQKDCTLESADGVYLATCTVGVTRQTLGTGSKAFVMCDSLSDSSKHRLSELRK
KVKPGREILERGNSFYTIVDGPSWVEAEANAVKLGGHLVTINDEEENKWLAENFDYIGKWIGLTDSAHEGVFKWASGASV
DFTNWAADQPDNYHGIQHYAIFSGHWNYKGIKYGWDDLQDMKNDENVNQGIAEIPRNSASSDNHAQNCEG

Sequences:

>Translated_310_residues
MPRTRSIQDKSCLAKNAGCGIAWLITQGLSGRGSKNGFCAPNGYTLTSVLITAVIMGMITVPLMKISMQVGRTQRRSLNR
EKAQFNALVISQVGRKSNDISEVEAFAKQKDCTLESADGVYLATCTVGVTRQTLGTGSKAFVMCDSLSDSSKHRLSELRK
KVKPGREILERGNSFYTIVDGPSWVEAEANAVKLGGHLVTINDEEENKWLAENFDYIGKWIGLTDSAHEGVFKWASGASV
DFTNWAADQPDNYHGIQHYAIFSGHWNYKGIKYGWDDLQDMKNDENVNQGIAEIPRNSASSDNHAQNCEG
>Mature_309_residues
PRTRSIQDKSCLAKNAGCGIAWLITQGLSGRGSKNGFCAPNGYTLTSVLITAVIMGMITVPLMKISMQVGRTQRRSLNRE
KAQFNALVISQVGRKSNDISEVEAFAKQKDCTLESADGVYLATCTVGVTRQTLGTGSKAFVMCDSLSDSSKHRLSELRKK
VKPGREILERGNSFYTIVDGPSWVEAEANAVKLGGHLVTINDEEENKWLAENFDYIGKWIGLTDSAHEGVFKWASGASVD
FTNWAADQPDNYHGIQHYAIFSGHWNYKGIKYGWDDLQDMKNDENVNQGIAEIPRNSASSDNHAQNCEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI18426875, Length=99, Percent_Identity=35.3535353535354, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI18426877, Length=99, Percent_Identity=35.3535353535354, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI18426873, Length=94, Percent_Identity=37.2340425531915, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4502253, Length=94, Percent_Identity=37.2340425531915, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI18641360, Length=102, Percent_Identity=37.2549019607843, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34094; Mature: 33962

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS50041 C_TYPE_LECTIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTRSIQDKSCLAKNAGCGIAWLITQGLSGRGSKNGFCAPNGYTLTSVLITAVIMGMIT
CCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VPLMKISMQVGRTQRRSLNREKAQFNALVISQVGRKSNDISEVEAFAKQKDCTLESADGV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCE
YLATCTVGVTRQTLGTGSKAFVMCDSLSDSSKHRLSELRKKVKPGREILERGNSFYTIVD
EEEEEECCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEC
GPSWVEAEANAVKLGGHLVTINDEEENKWLAENFDYIGKWIGLTDSAHEGVFKWASGASV
CCCEECCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
DFTNWAADQPDNYHGIQHYAIFSGHWNYKGIKYGWDDLQDMKNDENVNQGIAEIPRNSAS
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCC
SDNHAQNCEG
CCCCCCCCCC
>Mature Secondary Structure 
PRTRSIQDKSCLAKNAGCGIAWLITQGLSGRGSKNGFCAPNGYTLTSVLITAVIMGMIT
CCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VPLMKISMQVGRTQRRSLNREKAQFNALVISQVGRKSNDISEVEAFAKQKDCTLESADGV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCE
YLATCTVGVTRQTLGTGSKAFVMCDSLSDSSKHRLSELRKKVKPGREILERGNSFYTIVD
EEEEEECCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEEEEC
GPSWVEAEANAVKLGGHLVTINDEEENKWLAENFDYIGKWIGLTDSAHEGVFKWASGASV
CCCEECCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
DFTNWAADQPDNYHGIQHYAIFSGHWNYKGIKYGWDDLQDMKNDENVNQGIAEIPRNSAS
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCC
SDNHAQNCEG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA