| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863111
Identifier: 33863111
GI number: 33863111
Start: 914700
End: 915230
Strand: Reverse
Name: 33863111
Synonym: PMT0839
Alternate gene names: NA
Gene position: 915230-914700 (Counterclockwise)
Preceding gene: 33863113
Following gene: 33863109
Centisome position: 37.96
GC content: 50.85
Gene sequence:
>531_bases ATGGCCTTGAACCGCTTGAACGGTCGTTATGGGCACTTCTGGGAGGCCAGGTATTTCTCAACGCCTATCCACCCAAAAGA TCACCGGCGAATGCTGAATACCTTGAGGTATATCCATGCCAATCCCAAAGCAACAGGGCTAAGGAAAGGTTTTTATGACC CCTATTCCAACTATGGCCACTACGGCAGGTTGCAAGCAGACGGCATCAGTGAATGGAGCCCTGCCTTTTTAAAGCTCTCG GCAACGCTCGATGGATGCTCCAGGCGATATGAGCGGTTCTGCCAAAAGTATCGCCATCACAGCAAAGGGGTAGCTAAGTG CCATTGGGGCTCAAGGATGCTGAAGCGATTTGTTCAGAGCAGCAGGAGCAACAGAAGCAAGAGAAATCGAATATCACCAG GTCAACAGCAACTCCCTTTTGCTTTTGATGTTCGCCCCAATCAAATCCCAGAGGGGTGGCATCAGGTTGCGGTGAGATTT CGCAAGACGAATGGCATCCGTGATGGTGATTCACGTCTGTTGCTGTGGTGA
Upstream 100 bases:
>100_bases GATGAATACAAGTACAACCAGCATTAACGCTTGTTCAAGAAGGGCAAAAAAAGACCCCCGAAGGGGCGGGTAGCTGTCGC TTGGTTAAAGAGCGTCAACC
Downstream 100 bases:
>100_bases TTAAGTTAGGAATATAAGTAGTTTTAGGGTAAAAGAAGTTGAAGGTGAATTTATGATGAATGCGAAAAACTATTGATGAT TTTTACCTGCTAAATAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MALNRLNGRYGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKATGLRKGFYDPYSNYGHYGRLQADGISEWSPAFLKLS ATLDGCSRRYERFCQKYRHHSKGVAKCHWGSRMLKRFVQSSRSNRSKRNRISPGQQQLPFAFDVRPNQIPEGWHQVAVRF RKTNGIRDGDSRLLLW
Sequences:
>Translated_176_residues MALNRLNGRYGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKATGLRKGFYDPYSNYGHYGRLQADGISEWSPAFLKLS ATLDGCSRRYERFCQKYRHHSKGVAKCHWGSRMLKRFVQSSRSNRSKRNRISPGQQQLPFAFDVRPNQIPEGWHQVAVRF RKTNGIRDGDSRLLLW >Mature_175_residues ALNRLNGRYGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKATGLRKGFYDPYSNYGHYGRLQADGISEWSPAFLKLSA TLDGCSRRYERFCQKYRHHSKGVAKCHWGSRMLKRFVQSSRSNRSKRNRISPGQQQLPFAFDVRPNQIPEGWHQVAVRFR KTNGIRDGDSRLLLW
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20795; Mature: 20664
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNRLNGRYGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKATGLRKGFYDPYSNYGH CCCCCCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC YGRLQADGISEWSPAFLKLSATLDGCSRRYERFCQKYRHHSKGVAKCHWGSRMLKRFVQS CCCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SRSNRSKRNRISPGQQQLPFAFDVRPNQIPEGWHQVAVRFRKTNGIRDGDSRLLLW HHHCHHHHHCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECC >Mature Secondary Structure ALNRLNGRYGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKATGLRKGFYDPYSNYGH CCCCCCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC YGRLQADGISEWSPAFLKLSATLDGCSRRYERFCQKYRHHSKGVAKCHWGSRMLKRFVQS CCCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SRSNRSKRNRISPGQQQLPFAFDVRPNQIPEGWHQVAVRFRKTNGIRDGDSRLLLW HHHCHHHHHCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA