| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863078
Identifier: 33863078
GI number: 33863078
Start: 883362
End: 883835
Strand: Direct
Name: 33863078
Synonym: PMT0806
Alternate gene names: NA
Gene position: 883362-883835 (Clockwise)
Preceding gene: 33863073
Following gene: 33863082
Centisome position: 36.64
GC content: 48.52
Gene sequence:
>474_bases TTGCAGTCAAAGGTTTTCAGGTTGATCACTGCAGGACTGATCAGCACTGGAGCTCTGCTAAACCAAACCGCTGCCGAAGC ACTACCAGATGGCATTGAGTATTACGGCCAGCGCATGGAAGCCATGTTCTTACGACTGGACCTCAACGGCGATGGTCGGC TGGATGCAAGCGAGGTTGGAGAAAAGACTTACCTGATAAGAAGGCTGAATAGAAAGAATTCACGAGGTTATTTAATTTTA GAGGACTTGCGACCTCCCGGCACTCATCCAAACGGTAAACGTCTCCAACAACGTTTCAAGCAAGCCGATATCGACGGCAA TGGGAAACTCAATCGCGATGAAGCTCAATCAATCCGCTGGCTGGCCAACAACTTCAACAAACTGGATTTAAACAACGATA GAGATATAACGATGGAGGAACTTTGGATGCTGCAAAGATCGCTGGCGCCGCATCCTCATCCTCGCAAGCACTAA
Upstream 100 bases:
>100_bases GAGCTTTGGTCATAGTTCAGTCATCGACATTGATGGACACGATCCATAGGCTGATTGCATGACAAATCAGCCAAGGTCCC CTCTTTGCTGGCCGAAATCA
Downstream 100 bases:
>100_bases CGACGCATCTGGCGACGGATTGGCCTTCTGGAAACCTTCTTCGGCCTACTCCATAGTTGTGTAAAAAACCTCAACATCCG CCAGCTGCCACCAAGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MQSKVFRLITAGLISTGALLNQTAAEALPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVGEKTYLIRRLNRKNSRGYLIL EDLRPPGTHPNGKRLQQRFKQADIDGNGKLNRDEAQSIRWLANNFNKLDLNNDRDITMEELWMLQRSLAPHPHPRKH
Sequences:
>Translated_157_residues MQSKVFRLITAGLISTGALLNQTAAEALPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVGEKTYLIRRLNRKNSRGYLIL EDLRPPGTHPNGKRLQQRFKQADIDGNGKLNRDEAQSIRWLANNFNKLDLNNDRDITMEELWMLQRSLAPHPHPRKH >Mature_157_residues MQSKVFRLITAGLISTGALLNQTAAEALPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVGEKTYLIRRLNRKNSRGYLIL EDLRPPGTHPNGKRLQQRFKQADIDGNGKLNRDEAQSIRWLANNFNKLDLNNDRDITMEELWMLQRSLAPHPHPRKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18052; Mature: 18052
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSKVFRLITAGLISTGALLNQTAAEALPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHH EKTYLIRRLNRKNSRGYLILEDLRPPGTHPNGKRLQQRFKQADIDGNGKLNRDEAQSIRW HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LANNFNKLDLNNDRDITMEELWMLQRSLAPHPHPRKH HHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQSKVFRLITAGLISTGALLNQTAAEALPDGIEYYGQRMEAMFLRLDLNGDGRLDASEVG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHH EKTYLIRRLNRKNSRGYLILEDLRPPGTHPNGKRLQQRFKQADIDGNGKLNRDEAQSIRW HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LANNFNKLDLNNDRDITMEELWMLQRSLAPHPHPRKH HHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA