| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is isiB [H]
Identifier: 33863073
GI number: 33863073
Start: 877149
End: 877673
Strand: Direct
Name: isiB [H]
Synonym: PMT0801
Alternate gene names: 33863073
Gene position: 877149-877673 (Clockwise)
Preceding gene: 33863067
Following gene: 33863078
Centisome position: 36.38
GC content: 44.0
Gene sequence:
>525_bases ATGGCTGTCGGTATCTACTTTGCAACAACAACAGGTAAAACTGAGGATATTGCTGATCGGCTTCATCCTCTCCTCAATGG CACTAATACACCTCAGGATTTAGCTGATCTACAGGACTTAAGCCCGCTAAACGATTTAGATGCGATTATCTGCGGTATTC CAACATGGAACACAGGTGCAGATAGTGAACGATCTGGTACAGCGTGGGATTCCATGCTCGAAGGCATCTCCAAGCTAAGC CTTAGTGGTAAACAAGTCGCAATCTATGGGCTCGGAGACTCATCGACTTATACCGAAAACTTCTGTGATGCTATTGAAGA GCTGCATCAATGCTTCAAAAATGCAGGAGCGACAATGGTGGGATATGTCTCAAAAGATGGTTATACATTTGAAGATTCAA AGAGTTTAATAGGGGACAAGTTTTGTGGTCTACCCCTCGATGAAGACAGCGAATCAGACATGACGGATGATCGACTGATG TCATGGGCAATTCAGCTCAAGCAAGAGATACCTGCGTTAAATTAA
Upstream 100 bases:
>100_bases AACAATCAATAATTTGTATAAATAAGCACGGGATTGAGTTAATAATGGACGACCTGAATAAGCCTTGATGCATTAAGACT GGTTTGCTTGTATTAAATCC
Downstream 100 bases:
>100_bases TGATACTTACAAGATATCTCTATTAAACAAGAGATCACAATTGCAAACAACTCATCCACTCTTTTTTTTACATCACATCG ATCGATTAATAGCCTGGCAT
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MAVGIYFATTTGKTEDIADRLHPLLNGTNTPQDLADLQDLSPLNDLDAIICGIPTWNTGADSERSGTAWDSMLEGISKLS LSGKQVAIYGLGDSSTYTENFCDAIEELHQCFKNAGATMVGYVSKDGYTFEDSKSLIGDKFCGLPLDEDSESDMTDDRLM SWAIQLKQEIPALN
Sequences:
>Translated_174_residues MAVGIYFATTTGKTEDIADRLHPLLNGTNTPQDLADLQDLSPLNDLDAIICGIPTWNTGADSERSGTAWDSMLEGISKLS LSGKQVAIYGLGDSSTYTENFCDAIEELHQCFKNAGATMVGYVSKDGYTFEDSKSLIGDKFCGLPLDEDSESDMTDDRLM SWAIQLKQEIPALN >Mature_173_residues AVGIYFATTTGKTEDIADRLHPLLNGTNTPQDLADLQDLSPLNDLDAIICGIPTWNTGADSERSGTAWDSMLEGISKLSL SGKQVAIYGLGDSSTYTENFCDAIEELHQCFKNAGATMVGYVSKDGYTFEDSKSLIGDKFCGLPLDEDSESDMTDDRLMS WAIQLKQEIPALN
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=177, Percent_Identity=35.5932203389831, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1789262, Length=174, Percent_Identity=36.2068965517241, Blast_Score=105, Evalue=1e-24,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 18886; Mature: 18755
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGIYFATTTGKTEDIADRLHPLLNGTNTPQDLADLQDLSPLNDLDAIICGIPTWNTGA CEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC DSERSGTAWDSMLEGISKLSLSGKQVAIYGLGDSSTYTENFCDAIEELHQCFKNAGATMV CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEE GYVSKDGYTFEDSKSLIGDKFCGLPLDEDSESDMTDDRLMSWAIQLKQEIPALN EEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVGIYFATTTGKTEDIADRLHPLLNGTNTPQDLADLQDLSPLNDLDAIICGIPTWNTGA EEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC DSERSGTAWDSMLEGISKLSLSGKQVAIYGLGDSSTYTENFCDAIEELHQCFKNAGATMV CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEE GYVSKDGYTFEDSKSLIGDKFCGLPLDEDSESDMTDDRLMSWAIQLKQEIPALN EEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1720613; 2119231; 10388575 [H]