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The map label for this gene is ycjO [C]

Identifier: 33862965

GI number: 33862965

Start: 748007

End: 748873

Strand: Reverse

Name: ycjO [C]

Synonym: PMT0693

Alternate gene names: 33862965

Gene position: 748873-748007 (Counterclockwise)

Preceding gene: 33862966

Following gene: 33862964

Centisome position: 31.06

GC content: 47.87

Gene sequence:

>867_bases
ATGATCCAATTGCTTCTATTGCCGGCAGCTCTATTAATTGCCTTGGTCTTTGGTATTCCTCTACTGCGTTATTCCTGGTT
GAGCTTCCATGCTGATTCAGTCCTCACAGGCTTAGTTGCGATTCCTAATCATGGTGCGAATTGGCTTCGTCTACTGCACG
ACCAACGCTTCTGGCAAGACACCTATCAGACAGCCCGCTTCGCAACAGTTTCAGTCAGCCTAGAACTATTACTTGCTATA
GCTATAGCCCTCTTACTCGATCAGCATTGGCGGGGTCGAGGTGTTGTAAGGGCAATCAGTTTGCTCCCATGGGCTCTGCC
AACGACTGTGATGGCTCTTGGCTGGCGTTGGATCTTTAATACACCTTACGGACCTATTGAGCAGTTCACAGAACTGATTG
GACTACAACCTCTAAACATCCTCTCGAATCCATATATCACCTGGCTGGCCACGGTTGTTGGTGATGTATGGAAGACCACG
CCATTTGCTGCTCTGATTCTTTTGGCTGGCTTGCAAACTATTCCCAATGATCTCTACGAAGCTTTCTATCTCGAAGGTGG
CCATCCACGAGCCGCACTATTTAAGATCACCTTGCCGCTCTTGCAACCTTATTTACTCCTTAGTCTTTTATTTCGCCTTG
CGCAGGCCTTCGGCGTTTTCGACTTGATTCAGGTGATGACTGGTGGGGGGCCGGCAGGAAGCACGGAAAGCCTTGCTTTA
TATGCTTATTTAAACGCAATGAGATTCCTAGATTTTGGCTATAGCTCCACTGTAATGATCAGCGGGTTTCTTCTACTTGT
TATTGCCTGTCTGCTTGTTTGGCTGATCATCAACCAGGCCAGCCATTGGCGAGAGGCAATGAAATGA

Upstream 100 bases:

>100_bases
ATCTTAGTTCGATTTTAACAGGCCAATCCAGTGTTAGCGATGCAATGGCCAACGCCCAAGCAAACACCGAGAAGATTCTT
ATGGCGGCAAGAGAAACTAA

Downstream 100 bases:

>100_bases
TGCGTCAGCGAAATCTTTGGATCATTGTTCTCCTGCTTTGGTCTTTAGCACCTCTGCTTTGGCAGCTCTATACATCTTTT
TGCACCCATGAAGCTCTTCT

Product: sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MIQLLLLPAALLIALVFGIPLLRYSWLSFHADSVLTGLVAIPNHGANWLRLLHDQRFWQDTYQTARFATVSVSLELLLAI
AIALLLDQHWRGRGVVRAISLLPWALPTTVMALGWRWIFNTPYGPIEQFTELIGLQPLNILSNPYITWLATVVGDVWKTT
PFAALILLAGLQTIPNDLYEAFYLEGGHPRAALFKITLPLLQPYLLLSLLFRLAQAFGVFDLIQVMTGGGPAGSTESLAL
YAYLNAMRFLDFGYSSTVMISGFLLLVIACLLVWLIINQASHWREAMK

Sequences:

>Translated_288_residues
MIQLLLLPAALLIALVFGIPLLRYSWLSFHADSVLTGLVAIPNHGANWLRLLHDQRFWQDTYQTARFATVSVSLELLLAI
AIALLLDQHWRGRGVVRAISLLPWALPTTVMALGWRWIFNTPYGPIEQFTELIGLQPLNILSNPYITWLATVVGDVWKTT
PFAALILLAGLQTIPNDLYEAFYLEGGHPRAALFKITLPLLQPYLLLSLLFRLAQAFGVFDLIQVMTGGGPAGSTESLAL
YAYLNAMRFLDFGYSSTVMISGFLLLVIACLLVWLIINQASHWREAMK
>Mature_288_residues
MIQLLLLPAALLIALVFGIPLLRYSWLSFHADSVLTGLVAIPNHGANWLRLLHDQRFWQDTYQTARFATVSVSLELLLAI
AIALLLDQHWRGRGVVRAISLLPWALPTTVMALGWRWIFNTPYGPIEQFTELIGLQPLNILSNPYITWLATVVGDVWKTT
PFAALILLAGLQTIPNDLYEAFYLEGGHPRAALFKITLPLLQPYLLLSLLFRLAQAFGVFDLIQVMTGGGPAGSTESLAL
YAYLNAMRFLDFGYSSTVMISGFLLLVIACLLVWLIINQASHWREAMK

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=240, Percent_Identity=25, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790465, Length=216, Percent_Identity=31.4814814814815, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789861, Length=239, Percent_Identity=28.0334728033473, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32177; Mature: 32177

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLLLLPAALLIALVFGIPLLRYSWLSFHADSVLTGLVAIPNHGANWLRLLHDQRFWQD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TYQTARFATVSVSLELLLAIAIALLLDQHWRGRGVVRAISLLPWALPTTVMALGWRWIFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC
TPYGPIEQFTELIGLQPLNILSNPYITWLATVVGDVWKTTPFAALILLAGLQTIPNDLYE
CCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AFYLEGGHPRAALFKITLPLLQPYLLLSLLFRLAQAFGVFDLIQVMTGGGPAGSTESLAL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YAYLNAMRFLDFGYSSTVMISGFLLLVIACLLVWLIINQASHWREAMK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQLLLLPAALLIALVFGIPLLRYSWLSFHADSVLTGLVAIPNHGANWLRLLHDQRFWQD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TYQTARFATVSVSLELLLAIAIALLLDQHWRGRGVVRAISLLPWALPTTVMALGWRWIFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC
TPYGPIEQFTELIGLQPLNILSNPYITWLATVVGDVWKTTPFAALILLAGLQTIPNDLYE
CCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AFYLEGGHPRAALFKITLPLLQPYLLLSLLFRLAQAFGVFDLIQVMTGGGPAGSTESLAL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YAYLNAMRFLDFGYSSTVMISGFLLLVIACLLVWLIINQASHWREAMK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA