Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is ycjP [C]

Identifier: 33862964

GI number: 33862964

Start: 747192

End: 748010

Strand: Reverse

Name: ycjP [C]

Synonym: PMT0692

Alternate gene names: 33862964

Gene position: 748010-747192 (Counterclockwise)

Preceding gene: 33862965

Following gene: 33862963

Centisome position: 31.03

GC content: 46.89

Gene sequence:

>819_bases
ATGATGCGTCAGCGAAATCTTTGGATCATTGTTCTCCTGCTTTGGTCTTTAGCACCTCTGCTTTGGCAGCTCTATACATC
TTTTTGCACCCATGAAGCTCTTCTACAACCATTGGCTGAGCATAATCAGCGTTGGACACTTGACAACTATCGCCAGGTAT
TGACAGCCAACCCTCCCTTCTGGCGTTATCTATTGAACAGTGTCATCGTTGGCATTAGCTCAACAGGATTAACCCTACTG
ATTGCTATTCCAGCCGCCTATTCTCTTTCAAGGGTCTCGCAAAATATTGCCAGAACGGCAAAACTTATACTGCTTGGTGC
AGCTCTATTTCCATATGTTCTGCTTTTTTTGGCGTTATTAGAACTTGCAAGGAGTTTCAACCTCGGAAACAATCTGCTTG
CGCTCAGTTTTCCCTATGCAGGCTTATCTATGCCGTTGGCTGTGTTGTTGCTTTTATCAGCCTTCCGCGATCTACCTTCT
GAACTAGAAGAAGCCGCGAGGCTTGAAGGTTTTGACTTATGGCAGAGATTGCGCTGGGTATTGATTCCCCTAATCGGTCC
TGCAACCGCAAGCACTGCCATCTTGGTCTTTCTCTTCTCCTGGAATGAATATCCAATCGCATTGACCTGGATTAGTCGAG
CTGATCTCCTTACACTTCCAGTTGCCATAGCACGAATTGCAGGTTCATCGGTCTACTCAATTCCCTATGGCGCTTATGCA
GCTGCCACCGTTCTAGGTGCTCTGCCGCTCTTGTTACTCGTGCTCATCTTTCAGCGACAGATCGTTTCCGGTCTGACACA
GGGAGCAATTAAAGGATGA

Upstream 100 bases:

>100_bases
GCTCCACTGTAATGATCAGCGGGTTTCTTCTACTTGTTATTGCCTGTCTGCTTGTTTGGCTGATCATCAACCAGGCCAGC
CATTGGCGAGAGGCAATGAA

Downstream 100 bases:

>100_bases
ATCTTGTTCTACAAAACATCGGTCGTCGTTTCGGTAGAAACTGGATTGTTCGTCATCTAGACCTTGAAGTGGGCCAGGGT
GAATGCCTTGCCCTACTTGG

Product: sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPFWRYLLNSVIVGISSTGLTLL
IAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALLELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPS
ELEEAARLEGFDLWQRLRWVLIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA
AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG

Sequences:

>Translated_272_residues
MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPFWRYLLNSVIVGISSTGLTLL
IAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALLELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPS
ELEEAARLEGFDLWQRLRWVLIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA
AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG
>Mature_272_residues
MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPFWRYLLNSVIVGISSTGLTLL
IAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALLELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPS
ELEEAARLEGFDLWQRLRWVLIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA
AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=268, Percent_Identity=30.2238805970149, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790464, Length=224, Percent_Identity=34.375, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789860, Length=219, Percent_Identity=25.1141552511416, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30158; Mature: 30158

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH
WRYLLNSVIVGISSTGLTLLIAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALL
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPSELEEAARLEGFDLWQRLRWV
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA
HHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCHHHH
AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH
WRYLLNSVIVGISSTGLTLLIAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALL
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPSELEEAARLEGFDLWQRLRWV
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA
HHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCHHHH
AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]