| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ycjP [C]
Identifier: 33862964
GI number: 33862964
Start: 747192
End: 748010
Strand: Reverse
Name: ycjP [C]
Synonym: PMT0692
Alternate gene names: 33862964
Gene position: 748010-747192 (Counterclockwise)
Preceding gene: 33862965
Following gene: 33862963
Centisome position: 31.03
GC content: 46.89
Gene sequence:
>819_bases ATGATGCGTCAGCGAAATCTTTGGATCATTGTTCTCCTGCTTTGGTCTTTAGCACCTCTGCTTTGGCAGCTCTATACATC TTTTTGCACCCATGAAGCTCTTCTACAACCATTGGCTGAGCATAATCAGCGTTGGACACTTGACAACTATCGCCAGGTAT TGACAGCCAACCCTCCCTTCTGGCGTTATCTATTGAACAGTGTCATCGTTGGCATTAGCTCAACAGGATTAACCCTACTG ATTGCTATTCCAGCCGCCTATTCTCTTTCAAGGGTCTCGCAAAATATTGCCAGAACGGCAAAACTTATACTGCTTGGTGC AGCTCTATTTCCATATGTTCTGCTTTTTTTGGCGTTATTAGAACTTGCAAGGAGTTTCAACCTCGGAAACAATCTGCTTG CGCTCAGTTTTCCCTATGCAGGCTTATCTATGCCGTTGGCTGTGTTGTTGCTTTTATCAGCCTTCCGCGATCTACCTTCT GAACTAGAAGAAGCCGCGAGGCTTGAAGGTTTTGACTTATGGCAGAGATTGCGCTGGGTATTGATTCCCCTAATCGGTCC TGCAACCGCAAGCACTGCCATCTTGGTCTTTCTCTTCTCCTGGAATGAATATCCAATCGCATTGACCTGGATTAGTCGAG CTGATCTCCTTACACTTCCAGTTGCCATAGCACGAATTGCAGGTTCATCGGTCTACTCAATTCCCTATGGCGCTTATGCA GCTGCCACCGTTCTAGGTGCTCTGCCGCTCTTGTTACTCGTGCTCATCTTTCAGCGACAGATCGTTTCCGGTCTGACACA GGGAGCAATTAAAGGATGA
Upstream 100 bases:
>100_bases GCTCCACTGTAATGATCAGCGGGTTTCTTCTACTTGTTATTGCCTGTCTGCTTGTTTGGCTGATCATCAACCAGGCCAGC CATTGGCGAGAGGCAATGAA
Downstream 100 bases:
>100_bases ATCTTGTTCTACAAAACATCGGTCGTCGTTTCGGTAGAAACTGGATTGTTCGTCATCTAGACCTTGAAGTGGGCCAGGGT GAATGCCTTGCCCTACTTGG
Product: sugar ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPFWRYLLNSVIVGISSTGLTLL IAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALLELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPS ELEEAARLEGFDLWQRLRWVLIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG
Sequences:
>Translated_272_residues MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPFWRYLLNSVIVGISSTGLTLL IAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALLELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPS ELEEAARLEGFDLWQRLRWVLIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG >Mature_272_residues MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPFWRYLLNSVIVGISSTGLTLL IAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALLELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPS ELEEAARLEGFDLWQRLRWVLIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG
Specific function: May participate in oleandomycin secretion during antibiotic production [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=268, Percent_Identity=30.2238805970149, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1790464, Length=224, Percent_Identity=34.375, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789860, Length=219, Percent_Identity=25.1141552511416, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30158; Mature: 30158
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH WRYLLNSVIVGISSTGLTLLIAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALL HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPSELEEAARLEGFDLWQRLRWV HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA HHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCHHHH AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMRQRNLWIIVLLLWSLAPLLWQLYTSFCTHEALLQPLAEHNQRWTLDNYRQVLTANPPF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH WRYLLNSVIVGISSTGLTLLIAIPAAYSLSRVSQNIARTAKLILLGAALFPYVLLFLALL HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELARSFNLGNNLLALSFPYAGLSMPLAVLLLLSAFRDLPSELEEAARLEGFDLWQRLRWV HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LIPLIGPATASTAILVFLFSWNEYPIALTWISRADLLTLPVAIARIAGSSVYSIPYGAYA HHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEECCCHHHH AATVLGALPLLLLVLIFQRQIVSGLTQGAIKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8244027 [H]