| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is malE [C]
Identifier: 33862966
GI number: 33862966
Start: 748870
End: 750138
Strand: Reverse
Name: malE [C]
Synonym: PMT0694
Alternate gene names: 33862966
Gene position: 750138-748870 (Counterclockwise)
Preceding gene: 33862967
Following gene: 33862965
Centisome position: 31.11
GC content: 45.78
Gene sequence:
>1269_bases ATGAAGAGAAGGATATTTACGAAGATAGCTCTTCTATTCTCTTTGAGCAGTGTCGCACTATTTGCAAGTTGGGCCCTGAG TACTCGCCCTATTCAGATCAATATCTTGATGCCAGCTCCATTTGCTGAGTCAACAACTGATCTGGTACAACAATTCAACA AAGATCATCATGGCAGGATCCAACTACGGGTGACTCGAGGTCCACTTGAAACAGAAGCCGTATCTGATTTAGCCATCAGC AGTCTGCTTTTAGGTAAAAGTCCATTCGATGCACTTTTAATTGATGTAACTTGGTTGCCGAAATACGCCGCCGCAGGATG GCTTATTCCCTTGGATCCATGGATCGACCAACAAAAGATTGATTCCATTGCTCCGGGGGCAATGCTTGGAAATAATTTCG ACGGGAAACTGTATCGATGGCCGCTTGTGGCGGACATGGGATTGCTTTATTGGCGGACTGATTTGATGAATAAACCACCG CGTACCCCTGAGGAACTTATTAAAGTTAGTCTTAAACTCCAAAAAGAAGGTCGTGTTGCTAATGGCTATGTCTGGCAAGG CCGTCAATATGAAGGCCTAAGTTGTGTATTTCTAGAAGTTCTTGACGGATTTGGAGGGCAATGGCTTGAACCAGAAACCG ATAATGTTGGCCTCGACAGCTCCGCAAGTCTTAAGGCTGCAAGTTGGTTGCGTGAACTGATTCTCAGTGGAGCAAGCCCC AAAGCAGTGATCAACTATGCAGAAAATGAAGCTCTACAAGCGTTTAAGTCTGGAGATGTTGCGCTAATGCGTAACTGGCC TTATGCCTGGGGAGAACTTCAGAAGCCTAACAGCGATGTTAGAGGCAATGTTGGCGTAACCACGATGGTTGCTTCCGCTG GCAATCGATCCACATCAACCCTAGGCAGCTGGGGCTTCTCGATCCTCAAGGGCTCATCGAACCCTCAAGCAGCAGCAGAG GCAATTGCCTTCCTCACTTCAACATCTGCACAAAAAACACTGTTCTTGAACGAAAGTTATACGCCAACCAAAGTTGAACT ATTCAAAGACCAAGAGCTGCTCTCAAAGTCACAAATTCTTCCGGAGCTTGCTAAAGCCCTAGAAAGCACTGATGAACGTC CATCAACTCCTCTTTATGCACAGATTAGTGATGTATTACAACGAAATCTTAGTTCGATTTTAACAGGCCAATCCAGTGTT AGCGATGCAATGGCCAACGCCCAAGCAAACACCGAGAAGATTCTTATGGCGGCAAGAGAAACTAAATGA
Upstream 100 bases:
>100_bases ACCATGTGATAACTACTGCTAGTGTCGACTCATACGCAGTCAAATATTGTGGAGAAGAGCAAATGAAAAGTTTGGTTGAT AAAATAGAAGCAACGCAGCC
Downstream 100 bases:
>100_bases TCCAATTGCTTCTATTGCCGGCAGCTCTATTAATTGCCTTGGTCTTTGGTATTCCTCTACTGCGTTATTCCTGGTTGAGC TTCCATGCTGATTCAGTCCT
Product: sugar ABC transporter substrate-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKRRIFTKIALLFSLSSVALFASWALSTRPIQINILMPAPFAESTTDLVQQFNKDHHGRIQLRVTRGPLETEAVSDLAIS SLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQKIDSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMNKPP RTPEELIKVSLKLQKEGRVANGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLKAASWLRELILSGASP KAVINYAENEALQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVASAGNRSTSTLGSWGFSILKGSSNPQAAAE AIAFLTSTSAQKTLFLNESYTPTKVELFKDQELLSKSQILPELAKALESTDERPSTPLYAQISDVLQRNLSSILTGQSSV SDAMANAQANTEKILMAARETK
Sequences:
>Translated_422_residues MKRRIFTKIALLFSLSSVALFASWALSTRPIQINILMPAPFAESTTDLVQQFNKDHHGRIQLRVTRGPLETEAVSDLAIS SLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQKIDSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMNKPP RTPEELIKVSLKLQKEGRVANGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLKAASWLRELILSGASP KAVINYAENEALQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVASAGNRSTSTLGSWGFSILKGSSNPQAAAE AIAFLTSTSAQKTLFLNESYTPTKVELFKDQELLSKSQILPELAKALESTDERPSTPLYAQISDVLQRNLSSILTGQSSV SDAMANAQANTEKILMAARETK >Mature_422_residues MKRRIFTKIALLFSLSSVALFASWALSTRPIQINILMPAPFAESTTDLVQQFNKDHHGRIQLRVTRGPLETEAVSDLAIS SLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQKIDSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMNKPP RTPEELIKVSLKLQKEGRVANGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLKAASWLRELILSGASP KAVINYAENEALQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVASAGNRSTSTLGSWGFSILKGSSNPQAAAE AIAFLTSTSAQKTLFLNESYTPTKVELFKDQELLSKSQILPELAKALESTDERPSTPLYAQISDVLQRNLSSILTGQSSV SDAMANAQANTEKILMAARETK
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46342; Mature: 46342
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRIFTKIALLFSLSSVALFASWALSTRPIQINILMPAPFAESTTDLVQQFNKDHHGRI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEE QLRVTRGPLETEAVSDLAISSLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQKI EEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCEEECCCCCCHHHH DSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMNKPPRTPEELIKVSLKLQKEGRVA HHCCCCHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCEE NGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLKAASWLRELILSGASP CCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC KAVINYAENEALQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVASAGNRSTST HHEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCH LGSWGFSILKGSSNPQAAAEAIAFLTSTSAQKTLFLNESYTPTKVELFKDQELLSKSQIL HHHCCHHEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHH PELAKALESTDERPSTPLYAQISDVLQRNLSSILTGQSSVSDAMANAQANTEKILMAARE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHEEEECC TK CC >Mature Secondary Structure MKRRIFTKIALLFSLSSVALFASWALSTRPIQINILMPAPFAESTTDLVQQFNKDHHGRI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEE QLRVTRGPLETEAVSDLAISSLLLGKSPFDALLIDVTWLPKYAAAGWLIPLDPWIDQQKI EEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHCCCEEECCCCCCHHHH DSIAPGAMLGNNFDGKLYRWPLVADMGLLYWRTDLMNKPPRTPEELIKVSLKLQKEGRVA HHCCCCHHCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCEE NGYVWQGRQYEGLSCVFLEVLDGFGGQWLEPETDNVGLDSSASLKAASWLRELILSGASP CCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC KAVINYAENEALQAFKSGDVALMRNWPYAWGELQKPNSDVRGNVGVTTMVASAGNRSTST HHEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCH LGSWGFSILKGSSNPQAAAEAIAFLTSTSAQKTLFLNESYTPTKVELFKDQELLSKSQIL HHHCCHHEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHH PELAKALESTDERPSTPLYAQISDVLQRNLSSILTGQSSVSDAMANAQANTEKILMAARE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHEEEECC TK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]