| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862855
Identifier: 33862855
GI number: 33862855
Start: 640061
End: 641272
Strand: Reverse
Name: 33862855
Synonym: PMT0582
Alternate gene names: NA
Gene position: 641272-640061 (Counterclockwise)
Preceding gene: 33862856
Following gene: 33862854
Centisome position: 26.6
GC content: 50.91
Gene sequence:
>1212_bases TTGCAACGCTTCGAGCCCGATCAGCAGATTGCCTCACTAAAAAAGCAGAGTCAGCGCTTGTCGCTGACTCTGTACCACGA TTTAGCTCTCTACCTGCAATTATTACGGAGGGAACTGCTTAATGTTGTCCGTCAAGCCCTGTTCCTGTTGATAACTGATC GGGATCAGAATCGTCTGAGTGGGCTTTCGGACAAAACAAGGGCAGCTTTTCAAGATCAGGTTGAGCAATTGGTCTGTCAT TGCTGTTCCTTATTGACTGTCGAGCAGTTGATGGATCTGGTTCGCCAGATGGAACGTGAACGCCAGAGAAAGAGCGATCA AAACAGGCGTGAGCTGTTGTTGGCTTTTCGTTCTGAACAGGACTCCATGCAAGAAGCTGAGGGGTCCATTCACCTAAGCC TTGATCCTCCACTCGAGCATCCTGATCGTCTCGGCAGCATGTTGACTTTTGATCATGATCCCCAAAACGCAGGCTTAAGC GCAGGGTTGGCTAGTCATGAGGATGTCGTTGAGCCTGATTTAGGCAAGGATGATCAGGCTCAACTTGACTCTCAGGAGTT GGAGTTGGCCTCAGAGGACTCAGAACCGATTGGCGGGCAGAAGGGTGATCTTGATGTGCTTCGCTCTCTCTTTGTCATGG CTGGAGAGACCATGGCTACAGAGAATGTCTTGACTAGTGAATTCAGCGATTTGCAGCCTGGTGACAACACCCTGCTTCAC AGTGGTCTTGATGAGGAGCAGGTTTTTTTGCCCGTTAGCCCCCTTGAACTAGCACGTTGGCTGGAATCTCTTGATCGTGC CCTCGCTCGTAGATTGCGCAATCTTTCCCATGCTCTCAACGTGGAAATGTTGCGAGCCGGAATTGTCAACAGCCTCTTAC CAATCAGCTTGCTTGATGCTGTGTTGAATGGTCAGTTGGAATCTGAACCTGTGGCATCCAATTTGCTGAGATTACGCGTA CCGGTATCAACTAATCCAATGGTCTTAGAGGGCATGGAGATCATTTGCGTTCTTCTGCGCCCATCCGAAATGGAGTTTGA CGACCCGCGTTTGCGACGTTGTCGGGCTCAACTCAAGCGACATCGCCATACCTTGCTCAAAATGGTTCGACAACAGCGGC ACTGGCAACGTCGCGCCATGGCTCAGGAGGTAAAGCAACAGTGGTGGCAGAGCCCTTCCGCCAATCCTCCAACCAGTCCA CCCAAGGTCTGA
Upstream 100 bases:
>100_bases GCTACACCCTTGGGGAGGGGATTGAAGTCGACCAGACTGATTTCGCTACAGAAGTAGCGTCCATGAAGACTGCTTAATTT TGGCTGCGGAGAAGTAGAGA
Downstream 100 bases:
>100_bases GTAGGGATCAGTTGCAGCATCTACTCAGCTGGATGCGCATCCTGCAGCAAGCATTAACCCTGGAGGCTGAGAACGGTTTT AAGAATCTTGAGGGGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MQRFEPDQQIASLKKQSQRLSLTLYHDLALYLQLLRRELLNVVRQALFLLITDRDQNRLSGLSDKTRAAFQDQVEQLVCH CCSLLTVEQLMDLVRQMERERQRKSDQNRRELLLAFRSEQDSMQEAEGSIHLSLDPPLEHPDRLGSMLTFDHDPQNAGLS AGLASHEDVVEPDLGKDDQAQLDSQELELASEDSEPIGGQKGDLDVLRSLFVMAGETMATENVLTSEFSDLQPGDNTLLH SGLDEEQVFLPVSPLELARWLESLDRALARRLRNLSHALNVEMLRAGIVNSLLPISLLDAVLNGQLESEPVASNLLRLRV PVSTNPMVLEGMEIICVLLRPSEMEFDDPRLRRCRAQLKRHRHTLLKMVRQQRHWQRRAMAQEVKQQWWQSPSANPPTSP PKV
Sequences:
>Translated_403_residues MQRFEPDQQIASLKKQSQRLSLTLYHDLALYLQLLRRELLNVVRQALFLLITDRDQNRLSGLSDKTRAAFQDQVEQLVCH CCSLLTVEQLMDLVRQMERERQRKSDQNRRELLLAFRSEQDSMQEAEGSIHLSLDPPLEHPDRLGSMLTFDHDPQNAGLS AGLASHEDVVEPDLGKDDQAQLDSQELELASEDSEPIGGQKGDLDVLRSLFVMAGETMATENVLTSEFSDLQPGDNTLLH SGLDEEQVFLPVSPLELARWLESLDRALARRLRNLSHALNVEMLRAGIVNSLLPISLLDAVLNGQLESEPVASNLLRLRV PVSTNPMVLEGMEIICVLLRPSEMEFDDPRLRRCRAQLKRHRHTLLKMVRQQRHWQRRAMAQEVKQQWWQSPSANPPTSP PKV >Mature_403_residues MQRFEPDQQIASLKKQSQRLSLTLYHDLALYLQLLRRELLNVVRQALFLLITDRDQNRLSGLSDKTRAAFQDQVEQLVCH CCSLLTVEQLMDLVRQMERERQRKSDQNRRELLLAFRSEQDSMQEAEGSIHLSLDPPLEHPDRLGSMLTFDHDPQNAGLS AGLASHEDVVEPDLGKDDQAQLDSQELELASEDSEPIGGQKGDLDVLRSLFVMAGETMATENVLTSEFSDLQPGDNTLLH SGLDEEQVFLPVSPLELARWLESLDRALARRLRNLSHALNVEMLRAGIVNSLLPISLLDAVLNGQLESEPVASNLLRLRV PVSTNPMVLEGMEIICVLLRPSEMEFDDPRLRRCRAQLKRHRHTLLKMVRQQRHWQRRAMAQEVKQQWWQSPSANPPTSP PKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45966; Mature: 45966
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFEPDQQIASLKKQSQRLSLTLYHDLALYLQLLRRELLNVVRQALFLLITDRDQNRLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC GLSDKTRAAFQDQVEQLVCHCCSLLTVEQLMDLVRQMERERQRKSDQNRRELLLAFRSEQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH DSMQEAEGSIHLSLDPPLEHPDRLGSMLTFDHDPQNAGLSAGLASHEDVVEPDLGKDDQA HHHHHCCCCEEEEECCCCCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QLDSQELELASEDSEPIGGQKGDLDVLRSLFVMAGETMATENVLTSEFSDLQPGDNTLLH HCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHH SGLDEEQVFLPVSPLELARWLESLDRALARRLRNLSHALNVEMLRAGIVNSLLPISLLDA CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNGQLESEPVASNLLRLRVPVSTNPMVLEGMEIICVLLRPSEMEFDDPRLRRCRAQLKR HHCCCCCCCHHHHHHEEEECCCCCCCHHHCCHHHHEEEECCCCCCCCCHHHHHHHHHHHH HRHTLLKMVRQQRHWQRRAMAQEVKQQWWQSPSANPPTSPPKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQRFEPDQQIASLKKQSQRLSLTLYHDLALYLQLLRRELLNVVRQALFLLITDRDQNRLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC GLSDKTRAAFQDQVEQLVCHCCSLLTVEQLMDLVRQMERERQRKSDQNRRELLLAFRSEQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH DSMQEAEGSIHLSLDPPLEHPDRLGSMLTFDHDPQNAGLSAGLASHEDVVEPDLGKDDQA HHHHHCCCCEEEEECCCCCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QLDSQELELASEDSEPIGGQKGDLDVLRSLFVMAGETMATENVLTSEFSDLQPGDNTLLH HCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHH SGLDEEQVFLPVSPLELARWLESLDRALARRLRNLSHALNVEMLRAGIVNSLLPISLLDA CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNGQLESEPVASNLLRLRVPVSTNPMVLEGMEIICVLLRPSEMEFDDPRLRRCRAQLKR HHCCCCCCCHHHHHHEEEECCCCCCCHHHCCHHHHEEEECCCCCCCCCHHHHHHHHHHHH HRHTLLKMVRQQRHWQRRAMAQEVKQQWWQSPSANPPTSPPKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA