| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is recG [H]
Identifier: 33862854
GI number: 33862854
Start: 637572
End: 640112
Strand: Reverse
Name: recG [H]
Synonym: PMT0581
Alternate gene names: 33862854
Gene position: 640112-637572 (Counterclockwise)
Preceding gene: 33862855
Following gene: 33862853
Centisome position: 26.55
GC content: 54.19
Gene sequence:
>2541_bases GTGGTGGCAGAGCCCTTCCGCCAATCCTCCAACCAGTCCACCCAAGGTCTGAGTAGGGATCAGTTGCAGCATCTACTCAG CTGGATGCGCATCCTGCAGCAAGCATTAACCCTGGAGGCTGAGAACGGTTTTAAGAATCTTGAGGGGCGTCAGGAGAATT TTCATGCATTCTTGGTGCGTCAGTTAGCAGAACCACCCTCTGGATTGCTGCCGACTAAAAGTCAGGCTCGTCTCAGCCAA CTAGCTGAAGCCTTTGCGAGTTATCCAGACAGCTCTGAATCGGCGCGACGTCGATTGGTGACGGACTCAAGACAGCTTCT ACATGGCATACGCCAGGGATTGGAACCACCAACGCCAATAGGCCCTCCAAGACTCAAGAAGAGGGGAGCTGAAAGGCAAC GACAGATGCCTTTACCTAGTGGGAACCGCTCTCTGACGTTGGAAAGCCCACTGTCAGAGGTGAAAGGAATCGGCCCAAAA CTTGCTGAACGCTTGGCCGGGCTTGGATTACTGCTCGTCAAAGATTTGCTGCAGTACTACCCCAGGGACTATGTGGATTA TTCCTCGCTGCGGCGTATCCAGGCCCTAGAGGCAGGGGAGGCGGCCACGATTGTGGCCACAGTGAGGCGTTGTCATGGCT TCACCAGTCCACGCAACCCAAATTTGTCCATTCTTGAGCTGCAGCTTCAAGACCCAACTGGTCGGCTCAAAGTGAGGAGA TTTTTCGCTGGTCGGCGTTTCAGCAGCCCTGCTTACCTCAAAAGCCAGTCACGCCTTTACCCGCCTGGAGTCACTGTGGC CGTAAGTGGATTGGTCAAAGGGGGGCCTTACGGCATGAGTTTTCAAGACCCTTTGATTGAGGTCATGGAGAGTCCGCATT CGCCGTTGCGATCGCAAAGCATTGGCCGGTTGTTGCCTGTGTATGCCCTCACTGAAGGCCTTACGGCTGACCGTTTTCGT GATCTTGTACTGCAGATTTTACCTTTGGCAGCAAGTTGGCCTGAATCCCTGCCTGAACAACGTCGTCAGGTATTGCGTTT ACCCAGAAGAAGCGATGCCTTGGTCGCAATTCATCATCCAGACGATCAGCAGACATTGCAGTCTGCTCGACGTCGATTGG TCTTTGACGAGTTTCTTCTATTGCAGTTGGGGTTGTTGAAACGGCGAGCAGAGCTGCGCAGATGTTCTGCTCCTGTATTG CAGACGGCAGGGCGGCGAGATGGCCTTGTGGCTCGCTTCCTGGAGCTTTTGCCATTCCCTCTCACAGCAGCTCAACAGCG TGTGTTGACGGAGATCGAAGCTGACCTGGTGCTCTCGGAACCAATGGCTCGCCTCATTCAGGGAGATGTTGGTAGTGGCA AGACGGTTGTCGCCATAGCAGCCCTGCTCACAGCAGTAGAGGCCGGCTGGCAAGGCGCTTTCATGGCACCCACTGAGGTC CTTGCCGAGCAGCACTACCGCACATTGTGTTGTTGGTTGCCTCAGTTGCATGTCAGCGTCGAGTTACTTACGGGGGCAAC CACTCGTATACGTCGCCGTCAGATCCTTGATGATCTCGTCAATGGATCCTTGAAAATACTGGTAGGCACCCATGCCTTAA TCGAAGATCCTGTTGCCTTTTCAAGACTGGGTCTGGTGGTGGTTGACGAACAGCATCGCTTTGGAGTGAAGCAGCGCAAC AGATTGTTGAACAAGGGGCTTCAGCCTCATCTTTTGACGATGACAGCAACACCCATTCCTCGCACACTGGCACTTTCGCT GCATGGGGATTTGGATGTGAGTCAGATCGATGAATTACCTCCCGGTCGTACCCCCATTCAAACTCAGATGATTAGGGGCT GCGACCGCGATCAGGCCTATCAACTCATCCGTGATCAAGTGTCTCGTGGCCAGCGCGCTTATGTGGTGTTACCGCTGATC GAGGACTCCGAGAAACTTGATTTGCGTTCAGCAGTTAAGGTTCACGCCCATTTATCAGAGCAAGTGTTTGAGGAGTTCAC GGTTGGATTACTGCATGGACGTTTGAGTAGCTCAGAGAAGCAGGGCGTGATTCAATCCTTCGCAGCGGGTGATTGCCAGG TGCTGGTCTCTACCACTGTGGTGGAGGTAGGCGTGGATGTACCTCAAGCAAGTGTGATGGTGATCGACCACGCGGATCGC TTTGGGCTAGCCCAATTGCATCAACTGCGAGGTCGTGTGGGACGTGGCGCAGCGGCGTCCCATTGCGTACTGATCAATGA CAGCACAAACCCATTAGCAAGGCAGCGACTTGAAGTCCTTGTGCGCTCCAGTGATGGCTTTGAGATTGCTGAGATTGACT TACGCTTGCGAGGGCCAGGGCAGGTGCTTGGCACCAAACAGTCTGGATTGCCTGATTTGGCCCTGGCCAGCCTGGCGGAT GATGGGGCCGTGCTTGAAGAGGCTCGTGATGAGGCTCAAAGACTGCTCAGCGAAGATCCAAACCTGACTGACCACTCTCG GCTCAAGGAGTTGCTGGAGGCACAGTGGCAGCATCTGAGCGGAACAGCCCATCTGAATTGA
Upstream 100 bases:
>100_bases GTCGGGCTCAACTCAAGCGACATCGCCATACCTTGCTCAAAATGGTTCGACAACAGCGGCACTGGCAACGTCGCGCCATG GCTCAGGAGGTAAAGCAACA
Downstream 100 bases:
>100_bases GTCCATTGATTTTTCCACACACTTGAGACTCGTTTGAGTCTTAATACTCAGAAATCACGAGTCGATGTGCTTTCTGCTAC ATCGGTTGCCGGCCTAGCTT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MVAEPFRQSSNQSTQGLSRDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVRQLAEPPSGLLPTKSQARLSQ LAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPTPIGPPRLKKRGAERQRQMPLPSGNRSLTLESPLSEVKGIGPK LAERLAGLGLLLVKDLLQYYPRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQSIGRLLPVYALTEGLTADRFR DLVLQILPLAASWPESLPEQRRQVLRLPRRSDALVAIHHPDDQQTLQSARRRLVFDEFLLLQLGLLKRRAELRRCSAPVL QTAGRRDGLVARFLELLPFPLTAAQQRVLTEIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAFSRLGLVVVDEQHRFGVKQRN RLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLI EDSEKLDLRSAVKVHAHLSEQVFEEFTVGLLHGRLSSSEKQGVIQSFAAGDCQVLVSTTVVEVGVDVPQASVMVIDHADR FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPGQVLGTKQSGLPDLALASLAD DGAVLEEARDEAQRLLSEDPNLTDHSRLKELLEAQWQHLSGTAHLN
Sequences:
>Translated_846_residues MVAEPFRQSSNQSTQGLSRDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVRQLAEPPSGLLPTKSQARLSQ LAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPTPIGPPRLKKRGAERQRQMPLPSGNRSLTLESPLSEVKGIGPK LAERLAGLGLLLVKDLLQYYPRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQSIGRLLPVYALTEGLTADRFR DLVLQILPLAASWPESLPEQRRQVLRLPRRSDALVAIHHPDDQQTLQSARRRLVFDEFLLLQLGLLKRRAELRRCSAPVL QTAGRRDGLVARFLELLPFPLTAAQQRVLTEIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAFSRLGLVVVDEQHRFGVKQRN RLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLI EDSEKLDLRSAVKVHAHLSEQVFEEFTVGLLHGRLSSSEKQGVIQSFAAGDCQVLVSTTVVEVGVDVPQASVMVIDHADR FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPGQVLGTKQSGLPDLALASLAD DGAVLEEARDEAQRLLSEDPNLTDHSRLKELLEAQWQHLSGTAHLN >Mature_846_residues MVAEPFRQSSNQSTQGLSRDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVRQLAEPPSGLLPTKSQARLSQ LAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPTPIGPPRLKKRGAERQRQMPLPSGNRSLTLESPLSEVKGIGPK LAERLAGLGLLLVKDLLQYYPRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQSIGRLLPVYALTEGLTADRFR DLVLQILPLAASWPESLPEQRRQVLRLPRRSDALVAIHHPDDQQTLQSARRRLVFDEFLLLQLGLLKRRAELRRCSAPVL QTAGRRDGLVARFLELLPFPLTAAQQRVLTEIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAFSRLGLVVVDEQHRFGVKQRN RLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELPPGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLI EDSEKLDLRSAVKVHAHLSEQVFEEFTVGLLHGRLSSSEKQGVIQSFAAGDCQVLVSTTVVEVGVDVPQASVMVIDHADR FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPGQVLGTKQSGLPDLALASLAD DGAVLEEARDEAQRLLSEDPNLTDHSRLKELLEAQWQHLSGTAHLN
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=688, Percent_Identity=41.7151162790698, Blast_Score=417, Evalue=1e-117, Organism=Escherichia coli, GI1787357, Length=383, Percent_Identity=35.7702349869452, Blast_Score=232, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 93696; Mature: 93696
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAEPFRQSSNQSTQGLSRDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVR CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QLAEPPSGLLPTKSQARLSQLAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPTPI HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPPRLKKRGAERQRQMPLPSGNRSLTLESPLSEVKGIGPKLAERLAGLGLLLVKDLLQYY CCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHC PRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHH FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQS HHHCCCCCCCHHHCCCCCCCCCCHHHEEHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHH IGRLLPVYALTEGLTADRFRDLVLQILPLAASWPESLPEQRRQVLRLPRRSDALVAIHHP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECC DDQQTLQSARRRLVFDEFLLLQLGLLKRRAELRRCSAPVLQTAGRRDGLVARFLELLPFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCC LTAAQQRVLTEIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAF HHHHHHHHHHHHHHHHHHEEEEHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHH SRLGLVVVDEQHRFGVKQRNRLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELP HHCCEEEECCHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHCCC PGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLIEDSEKLDLRSAVKVHAHLSE CCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH QVFEEFTVGLLHGRLSSSEKQGVIQSFAAGDCQVLVSTTVVEVGVDVPQASVMVIDHADR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCC FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPG CCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCC QVLGTKQSGLPDLALASLADDGAVLEEARDEAQRLLSEDPNLTDHSRLKELLEAQWQHLS CEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC GTAHLN CCCCCC >Mature Secondary Structure MVAEPFRQSSNQSTQGLSRDQLQHLLSWMRILQQALTLEAENGFKNLEGRQENFHAFLVR CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QLAEPPSGLLPTKSQARLSQLAEAFASYPDSSESARRRLVTDSRQLLHGIRQGLEPPTPI HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPPRLKKRGAERQRQMPLPSGNRSLTLESPLSEVKGIGPKLAERLAGLGLLLVKDLLQYY CCHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHC PRDYVDYSSLRRIQALEAGEAATIVATVRRCHGFTSPRNPNLSILELQLQDPTGRLKVRR CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHH FFAGRRFSSPAYLKSQSRLYPPGVTVAVSGLVKGGPYGMSFQDPLIEVMESPHSPLRSQS HHHCCCCCCCHHHCCCCCCCCCCHHHEEHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHH IGRLLPVYALTEGLTADRFRDLVLQILPLAASWPESLPEQRRQVLRLPRRSDALVAIHHP HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECC DDQQTLQSARRRLVFDEFLLLQLGLLKRRAELRRCSAPVLQTAGRRDGLVARFLELLPFP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCC LTAAQQRVLTEIEADLVLSEPMARLIQGDVGSGKTVVAIAALLTAVEAGWQGAFMAPTEV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH LAEQHYRTLCCWLPQLHVSVELLTGATTRIRRRQILDDLVNGSLKILVGTHALIEDPVAF HHHHHHHHHHHHHHHHHHEEEEHHCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCHHH SRLGLVVVDEQHRFGVKQRNRLLNKGLQPHLLTMTATPIPRTLALSLHGDLDVSQIDELP HHCCEEEECCHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHCCC PGRTPIQTQMIRGCDRDQAYQLIRDQVSRGQRAYVVLPLIEDSEKLDLRSAVKVHAHLSE CCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH QVFEEFTVGLLHGRLSSSEKQGVIQSFAAGDCQVLVSTTVVEVGVDVPQASVMVIDHADR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCC FGLAQLHQLRGRVGRGAAASHCVLINDSTNPLARQRLEVLVRSSDGFEIAEIDLRLRGPG CCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCC QVLGTKQSGLPDLALASLADDGAVLEEARDEAQRLLSEDPNLTDHSRLKELLEAQWQHLS CEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC GTAHLN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]