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The map label for this gene is tsf [H]

Identifier: 33862856

GI number: 33862856

Start: 641296

End: 641952

Strand: Reverse

Name: tsf [H]

Synonym: PMT0583

Alternate gene names: 33862856

Gene position: 641952-641296 (Counterclockwise)

Preceding gene: 33862857

Following gene: 33862855

Centisome position: 26.63

GC content: 50.68

Gene sequence:

>657_bases
ATGGCGGACGTATCAGCCAAAATTGTCAAGGACCTGCGCGACAAGACCGGCGCGGGAATGATGGACTGCAAGAAAGCCCT
TGCAGAGAGTGACGGAGATATGGTCAAGGCGAGCGAATGGCTGCGTCAGAAGGGTATTGCCAGTGCAGAGAAGAAATCTT
CTCGCATTGCTGCTGAAGGTGCCATTGGTACTTACATCCACACCGGAGCCAGGGTCGGGGTACTTCTTGAGTTGAACTGC
GAAACTGATTTTGTTGCTCGTGGTGATTTGTTCCAAGGGCTTTTAAAGGATGTCGCTATGCAAGTGGCGGCCTGCCCGAA
TGTTGAATACGTGAGCACAGAAGAGATTCCTGTTGATGTCGTTGAAAAGGAAAAATCTATTGAGATGGGTCGCGATGATC
TTTCTGGCAAGCCTGAACAGATCAAGGCAAAGATCGTTGAAGGACGAATTGGCAAGCGCCTTAAGGAACTGGTCTTGCTT
GAGCAACCCTTTATCCGTGACAGCTCCATGACGGTTGCGGAACTCGTCAAGCAAGTTGCTGGCAAGATTGGAGAGAACAT
CAAGGTTCGCCGCTTCACCCGCTACACCCTTGGGGAGGGGATTGAAGTCGACCAGACTGATTTCGCTACAGAAGTAGCGT
CCATGAAGACTGCTTAA

Upstream 100 bases:

>100_bases
GACGACAGCGACGATTGAGTCCATTTACAGCGCTAAGTTCTCGCCGCCGTCCTCCTCATCTGGTCGGCTGCATCCCTAAT
ACTCCTCACCCCGATTACCA

Downstream 100 bases:

>100_bases
TTTTGGCTGCGGAGAAGTAGAGATTGCAACGCTTCGAGCCCGATCAGCAGATTGCCTCACTAAAAAAGCAGAGTCAGCGC
TTGTCGCTGACTCTGTACCA

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MADVSAKIVKDLRDKTGAGMMDCKKALAESDGDMVKASEWLRQKGIASAEKKSSRIAAEGAIGTYIHTGARVGVLLELNC
ETDFVARGDLFQGLLKDVAMQVAACPNVEYVSTEEIPVDVVEKEKSIEMGRDDLSGKPEQIKAKIVEGRIGKRLKELVLL
EQPFIRDSSMTVAELVKQVAGKIGENIKVRRFTRYTLGEGIEVDQTDFATEVASMKTA

Sequences:

>Translated_218_residues
MADVSAKIVKDLRDKTGAGMMDCKKALAESDGDMVKASEWLRQKGIASAEKKSSRIAAEGAIGTYIHTGARVGVLLELNC
ETDFVARGDLFQGLLKDVAMQVAACPNVEYVSTEEIPVDVVEKEKSIEMGRDDLSGKPEQIKAKIVEGRIGKRLKELVLL
EQPFIRDSSMTVAELVKQVAGKIGENIKVRRFTRYTLGEGIEVDQTDFATEVASMKTA
>Mature_217_residues
ADVSAKIVKDLRDKTGAGMMDCKKALAESDGDMVKASEWLRQKGIASAEKKSSRIAAEGAIGTYIHTGARVGVLLELNCE
TDFVARGDLFQGLLKDVAMQVAACPNVEYVSTEEIPVDVVEKEKSIEMGRDDLSGKPEQIKAKIVEGRIGKRLKELVLLE
QPFIRDSSMTVAELVKQVAGKIGENIKVRRFTRYTLGEGIEVDQTDFATEVASMKTA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI291084500, Length=151, Percent_Identity=33.112582781457, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI291084498, Length=100, Percent_Identity=40, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI291084502, Length=100, Percent_Identity=40, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI171846268, Length=100, Percent_Identity=40, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1786366, Length=163, Percent_Identity=41.7177914110429, Blast_Score=100, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17561440, Length=202, Percent_Identity=27.2277227722772, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19921466, Length=113, Percent_Identity=38.9380530973451, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 23782; Mature: 23651

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVSAKIVKDLRDKTGAGMMDCKKALAESDGDMVKASEWLRQKGIASAEKKSSRIAAEG
CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
AIGTYIHTGARVGVLLELNCETDFVARGDLFQGLLKDVAMQVAACPNVEYVSTEEIPVDV
CHHHHEECCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHH
VEKEKSIEMGRDDLSGKPEQIKAKIVEGRIGKRLKELVLLEQPFIRDSSMTVAELVKQVA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GKIGENIKVRRFTRYTLGEGIEVDQTDFATEVASMKTA
HHHCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ADVSAKIVKDLRDKTGAGMMDCKKALAESDGDMVKASEWLRQKGIASAEKKSSRIAAEG
CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
AIGTYIHTGARVGVLLELNCETDFVARGDLFQGLLKDVAMQVAACPNVEYVSTEEIPVDV
CHHHHEECCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHH
VEKEKSIEMGRDDLSGKPEQIKAKIVEGRIGKRLKELVLLEQPFIRDSSMTVAELVKQVA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GKIGENIKVRRFTRYTLGEGIEVDQTDFATEVASMKTA
HHHCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA