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The map label for this gene is ddpX [H]

Identifier: 33862853

GI number: 33862853

Start: 636489

End: 637253

Strand: Reverse

Name: ddpX [H]

Synonym: PMT0580

Alternate gene names: 33862853

Gene position: 637253-636489 (Counterclockwise)

Preceding gene: 33862854

Following gene: 33862851

Centisome position: 26.43

GC content: 53.59

Gene sequence:

>765_bases
GTGGAAATGTTGTCGGCGCGAACTTTTTTCCGGCTGCGCCCTTGGAGTGATTGGCCCATTCGTGATTGCGGGGAATCCCT
TAATCAAATACCTCTTTCGTTGCCCCGATTGGAGCCACATCCCTATGCATCCTTAGGTGCCCCCTATGGTGTAGATGCTG
ATCCCTTTCGGCTGCGTCAGGGTGTGATTGATCGGCTGCTGAGGGCTCAAGATGAGCTGCAGCAAGAGCATCCAGAACTT
TGTCTTGCCATTTTTGATGCCTGGCGACCGATTCCTGTTCAAGCTTTTATGGTCGAACATGCCATCGCTAAGGAGTGCCG
CAAACGCAAACTGAAGCGCGACGACCTTAGTCAGGCCGAGGAGCTGCAAAGGGTCATTGATGATGTTGGCAGGTTTTGGG
CTCCGCCCAGCCTCGATCCTTGTACTCCACCTCCTCATAGCACTGGAGCTGCCGTGGATCTCACCCTTGCTGATTGCCAC
GGAACAGCTCTGAATATGGGTGGCGAGATCGATGCTATTGGCAACATTTCAGAACCGGATCACTACCGCGAAGCTGCGCT
CGATCAACCTCAATCAGAGGCTTACCTCTGGCACCACAGGCGCCAATCTTTAGCAGAGGCCATGGGTAAAGCTGGGTTTT
CTCAGCACCCGAATGAATGGTGGCATTTCAGCTATGGAGATCAACTCTGGGCGTGGAGAACGGGTGTCGCAGAAGCAATC
TATGGAGCCTGTCCATTACCAGACAGCAAACCAAGGACGGCTTGA

Upstream 100 bases:

>100_bases
TGTTTGTCAAGGTTTTACTTGCTTGATGTTCGTTCGCTGTACCAATTTCCAATCTCGGAGCATCAACGAGATTTGCTTTG
TGGAAAACTAGGTTGTCGCT

Downstream 100 bases:

>100_bases
TCGCCAAGTTTGTTGACATGATCTCCGAGGCTGCGTCGACCACCAGCTTGCTTCCAGCTCAGCAATAGGGGCTCAAGCGT
GCTCTCGAGTTGATCGAGGG

Product: D-ala-D-ala dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MEMLSARTFFRLRPWSDWPIRDCGESLNQIPLSLPRLEPHPYASLGAPYGVDADPFRLRQGVIDRLLRAQDELQQEHPEL
CLAIFDAWRPIPVQAFMVEHAIAKECRKRKLKRDDLSQAEELQRVIDDVGRFWAPPSLDPCTPPPHSTGAAVDLTLADCH
GTALNMGGEIDAIGNISEPDHYREAALDQPQSEAYLWHHRRQSLAEAMGKAGFSQHPNEWWHFSYGDQLWAWRTGVAEAI
YGACPLPDSKPRTA

Sequences:

>Translated_254_residues
MEMLSARTFFRLRPWSDWPIRDCGESLNQIPLSLPRLEPHPYASLGAPYGVDADPFRLRQGVIDRLLRAQDELQQEHPEL
CLAIFDAWRPIPVQAFMVEHAIAKECRKRKLKRDDLSQAEELQRVIDDVGRFWAPPSLDPCTPPPHSTGAAVDLTLADCH
GTALNMGGEIDAIGNISEPDHYREAALDQPQSEAYLWHHRRQSLAEAMGKAGFSQHPNEWWHFSYGDQLWAWRTGVAEAI
YGACPLPDSKPRTA
>Mature_254_residues
MEMLSARTFFRLRPWSDWPIRDCGESLNQIPLSLPRLEPHPYASLGAPYGVDADPFRLRQGVIDRLLRAQDELQQEHPEL
CLAIFDAWRPIPVQAFMVEHAIAKECRKRKLKRDDLSQAEELQRVIDDVGRFWAPPSLDPCTPPPHSTGAAVDLTLADCH
GTALNMGGEIDAIGNISEPDHYREAALDQPQSEAYLWHHRRQSLAEAMGKAGFSQHPNEWWHFSYGDQLWAWRTGVAEAI
YGACPLPDSKPRTA

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 28767; Mature: 28767

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMLSARTFFRLRPWSDWPIRDCGESLNQIPLSLPRLEPHPYASLGAPYGVDADPFRLRQ
CCCCCCCHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHH
GVIDRLLRAQDELQQEHPELCLAIFDAWRPIPVQAFMVEHAIAKECRKRKLKRDDLSQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ELQRVIDDVGRFWAPPSLDPCTPPPHSTGAAVDLTLADCHGTALNMGGEIDAIGNISEPD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCH
HYREAALDQPQSEAYLWHHRRQSLAEAMGKAGFSQHPNEWWHFSYGDQLWAWRTGVAEAI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHH
YGACPLPDSKPRTA
HCCCCCCCCCCCCC
>Mature Secondary Structure
MEMLSARTFFRLRPWSDWPIRDCGESLNQIPLSLPRLEPHPYASLGAPYGVDADPFRLRQ
CCCCCCCHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHH
GVIDRLLRAQDELQQEHPELCLAIFDAWRPIPVQAFMVEHAIAKECRKRKLKRDDLSQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ELQRVIDDVGRFWAPPSLDPCTPPPHSTGAAVDLTLADCHGTALNMGGEIDAIGNISEPD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCH
HYREAALDQPQSEAYLWHHRRQSLAEAMGKAGFSQHPNEWWHFSYGDQLWAWRTGVAEAI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHH
YGACPLPDSKPRTA
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]