| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is mas1 [H]
Identifier: 33862821
GI number: 33862821
Start: 602635
End: 603345
Strand: Reverse
Name: mas1 [H]
Synonym: PMT0548
Alternate gene names: 33862821
Gene position: 603345-602635 (Counterclockwise)
Preceding gene: 33862822
Following gene: 33862818
Centisome position: 25.03
GC content: 51.76
Gene sequence:
>711_bases ATGATGCGCACCATCTTGATCAGTGGTGCCAGTCGAGGTATCGGCCGAGCAATTGCCGAACGAATGTTGGCTGATGGCCA TCGTCTTAGCCTTGGCCTACGGGACCCTAAATGCCTAATTGGCAGCTCACTTGACCCGGCAATCGCTGGTTCTGAACAAG TGTTCCTACATCCCTATGAAGCTCAGGACGTTAACGCTGCCGAAAGCTGGGTATCGGCAAGCTTGGCTCATTTCAGTGGT TTCGATAGTTTGATTCACTGTGCAGGCATATTTCATCGCACGCCCATACGGTTTAATGATAACCAGCAGCATGAGATTGA TCAGCTCTGGCAGGTGAATGTCATGGGCCCATGGATGCTCAGCCGCGCTGCTTGGTCTCAGCTTGAATGTCATGCTGAGG CGCGCATCATTGTGTTGGTGTCAATGAGTGGCAAGCGCTCCAAGGGCCGCTTGGCTGGCTACACCGTTAGTAAGTTTGCT CTGATGGGCCTTTGTCAGACCATGCGTAACGAAGGATGGGAGCAAGGCATCCGCGTGACAGCGATTTGTCCAGGTTGGGT CAATACCGATATGGCTGCCAGGGTTAAGTCTTTGCCCAAAGAGGCGATGACTCAGCCTGATGACATCGCCTCTTTGAGCT CAAATTTGCTACAGCTACCGAACAGTTGTGTACCGTTTGAACTGAGCATGAACTGCACACATGAGATCTAA
Upstream 100 bases:
>100_bases GTGGAGCGGGATTTCATCAAAAGGTTTTCAGATTCTGCAGAGTTATGAGAATCACGAGAACTCCCAGCAATAATGTTTTT GGATTTACGACCATTCAGAA
Downstream 100 bases:
>100_bases ACCCTTAGTAGAGTTGATGAGACTTTGTTATTGGCAAAGAAATGACGAGCAAAACTTTCCAAACCTCTTAAATAATATGG ATTCTTTGCGATAAGAATCG
Product: short-chain dehydrogenase/reductase
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYEAQDVNAAESWVSASLAHFSG FDSLIHCAGIFHRTPIRFNDNQQHEIDQLWQVNVMGPWMLSRAAWSQLECHAEARIIVLVSMSGKRSKGRLAGYTVSKFA LMGLCQTMRNEGWEQGIRVTAICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSNLLQLPNSCVPFELSMNCTHEI
Sequences:
>Translated_236_residues MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYEAQDVNAAESWVSASLAHFSG FDSLIHCAGIFHRTPIRFNDNQQHEIDQLWQVNVMGPWMLSRAAWSQLECHAEARIIVLVSMSGKRSKGRLAGYTVSKFA LMGLCQTMRNEGWEQGIRVTAICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSNLLQLPNSCVPFELSMNCTHEI >Mature_236_residues MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYEAQDVNAAESWVSASLAHFSG FDSLIHCAGIFHRTPIRFNDNQQHEIDQLWQVNVMGPWMLSRAAWSQLECHAEARIIVLVSMSGKRSKGRLAGYTVSKFA LMGLCQTMRNEGWEQGIRVTAICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSNLLQLPNSCVPFELSMNCTHEI
Specific function: Reduces deoxy-fructosyl-glutamine to mannopine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI33667109, Length=204, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI5031737, Length=200, Percent_Identity=29.5, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=187, Percent_Identity=29.4117647058824, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI87082100, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71994600, Length=193, Percent_Identity=26.9430051813472, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=219, Percent_Identity=26.027397260274, Blast_Score=62, Evalue=6e-11, Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=25.2525252525253, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI28571387, Length=234, Percent_Identity=28.6324786324786, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR013078 - InterPro: IPR015845 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short; PF00300 PGAM [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 25993; Mature: 25993
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYE CCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEECCC AQDVNAAESWVSASLAHFSGFDSLIHCAGIFHRTPIRFNDNQQHEIDQLWQVNVMGPWML CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECCCHHHH SRAAWSQLECHAEARIIVLVSMSGKRSKGRLAGYTVSKFALMGLCQTMRNEGWEQGIRVT HHHHHHHHHHCCCEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHCCHHCCCEEE AICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSNLLQLPNSCVPFELSMNCTHEI EEECCCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC >Mature Secondary Structure MMRTILISGASRGIGRAIAERMLADGHRLSLGLRDPKCLIGSSLDPAIAGSEQVFLHPYE CCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEECCC AQDVNAAESWVSASLAHFSGFDSLIHCAGIFHRTPIRFNDNQQHEIDQLWQVNVMGPWML CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECCCHHHH SRAAWSQLECHAEARIIVLVSMSGKRSKGRLAGYTVSKFALMGLCQTMRNEGWEQGIRVT HHHHHHHHHHCCCEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHCCHHCCCEEE AICPGWVNTDMAARVKSLPKEAMTQPDDIASLSSNLLQLPNSCVPFELSMNCTHEI EEECCCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1909028 [H]