| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862818
Identifier: 33862818
GI number: 33862818
Start: 598480
End: 598935
Strand: Reverse
Name: 33862818
Synonym: PMT0545
Alternate gene names: NA
Gene position: 598935-598480 (Counterclockwise)
Preceding gene: 33862821
Following gene: 33862816
Centisome position: 24.84
GC content: 49.78
Gene sequence:
>456_bases GTGTCATCAGAACCTGCTATCTCCAGGGGGTGTTCCAACGAAGCCATGAGTCGTCAACTCGCCGCAGGTCTAACCGTCAT ATTCCTGCTAGCACTACTGGCCACTAACCCCTCATTGAGCGGTATCCCCATCTATGGAGATACGTCTCTGCTTGAGTTCT GGGTGAAGAACATCGCTTTGGCGATGCCCCCAGCATTCACCCTTGGCATGTGCACAGTTCTTCTCTACAAAGGCTTCCGC TACCCCAGAGGAACAGTTTTTACCATCCTTGGTCTGCTTCAGCTTGTATTTGTTGGATGGCTTATTTGGCTAACGTTTCA AGCAGGAGTTGTCTGGGTGTCTTTACCAATCCTTCTTTTAGCTGCCTTTATGGGGCCAAAGTCAGCTAGAGCAACTTGGA AATGGCTCGGCGTTGATCGCTATTACAGAATCAAAGCGGAACCAGATGCCGATTGA
Upstream 100 bases:
>100_bases AGCTTTTTCGCGATCATCAAGTCATCTTGTTTCTACTTCTCAGTACGGGACTTATGGATGCCAGGATTGCTTGACTTGGT TTTCCACCAAGTCACTGCGA
Downstream 100 bases:
>100_bases TTGAGCTTCTTTTTTATCTTGTATGTTGGCAAGCCTCTCCAATTATCACTGGGACCATGCCCAGAGCTGGCCGCCCTCAC ATATCCCAGTATGCGAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSSEPAISRGCSNEAMSRQLAAGLTVIFLLALLATNPSLSGIPIYGDTSLLEFWVKNIALAMPPAFTLGMCTVLLYKGFR YPRGTVFTILGLLQLVFVGWLIWLTFQAGVVWVSLPILLLAAFMGPKSARATWKWLGVDRYYRIKAEPDAD
Sequences:
>Translated_151_residues MSSEPAISRGCSNEAMSRQLAAGLTVIFLLALLATNPSLSGIPIYGDTSLLEFWVKNIALAMPPAFTLGMCTVLLYKGFR YPRGTVFTILGLLQLVFVGWLIWLTFQAGVVWVSLPILLLAAFMGPKSARATWKWLGVDRYYRIKAEPDAD >Mature_150_residues SSEPAISRGCSNEAMSRQLAAGLTVIFLLALLATNPSLSGIPIYGDTSLLEFWVKNIALAMPPAFTLGMCTVLLYKGFRY PRGTVFTILGLLQLVFVGWLIWLTFQAGVVWVSLPILLLAAFMGPKSARATWKWLGVDRYYRIKAEPDAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16631; Mature: 16500
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEPAISRGCSNEAMSRQLAAGLTVIFLLALLATNPSLSGIPIYGDTSLLEFWVKNIAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AMPPAFTLGMCTVLLYKGFRYPRGTVFTILGLLQLVFVGWLIWLTFQAGVVWVSLPILLL HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFMGPKSARATWKWLGVDRYYRIKAEPDAD HHHHCCCCCCCCCEEECCCEEEEEECCCCCC >Mature Secondary Structure SSEPAISRGCSNEAMSRQLAAGLTVIFLLALLATNPSLSGIPIYGDTSLLEFWVKNIAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AMPPAFTLGMCTVLLYKGFRYPRGTVFTILGLLQLVFVGWLIWLTFQAGVVWVSLPILLL HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFMGPKSARATWKWLGVDRYYRIKAEPDAD HHHHCCCCCCCCCEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA