| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862621
Identifier: 33862621
GI number: 33862621
Start: 396287
End: 398272
Strand: Direct
Name: 33862621
Synonym: PMT0348
Alternate gene names: NA
Gene position: 396287-398272 (Clockwise)
Preceding gene: 33862619
Following gene: 33862622
Centisome position: 16.44
GC content: 55.44
Gene sequence:
>1986_bases GTGGACCTGCCAATAGATCATTTCCGCTTGCTGGGTGTCAGTCCTTCGGCAGACAGTGAGGCGATTTTGCGGGCCTTGGA GTTGAGGTTGGATCGCTGCCCTGACCAAGGTTTCACCCATGAGGTCTTAATTCAGCGGGCAGAATTGTTGCGGCTTTCAG CAGATTTGCTGACTGATCCGCCACGGCGTCAGGCCTATGAGACTGCCTTGTTGGAGCTCAGTCGTGATCATCCAGGTGAG ACCGCCGGTCTTGATGTGTCACCTAGTAGAGAGGTGGCAGGGCTGATCTTGCTGTTTGAAGCGAATTCTTCTCATGAGGT TTTTCATCTCGCCTCTCAGGGATTGCAACCGCCCCAGTCCCCGACGCTAGGTAGCGAACGAGAAGCTGACCTCGCTTTGT TGTTGGCACTGGCCTGTCGGGCTGCAGCCGCTGAGGAACAGGAACAACGGCGTTATGAAGCAGCAGCGTCTCTTCTGCAT GACGGGATCCAGTTGCTGCAGCGGATGGGCAAGCTCTCCGAAGAGTGCCACAAGCTTGAGAACGATTTAGATGCCCTTCT GCCCTATCGCATTCTCGACTTATTGAGTCGGGATCTTGGTGATCAGGTTTCTCACCAGGAAGGACTGCGCCTACTTGACA ACTTTGTGAGCCAGAGAGGAGGTCTTGAGGGAACGGCCCCATCGCCTGCACCTGGTGGTCTTGATCAGTCCGAATTTGAC AACTTCTTCAAGCAGATCAGAAAGTTTTTAACTGTTCAGGAACAGGTTGATCTTTTCCTGCGCTGGCAGCAAGCCGGATC AGCAGATGCGGGTTTCCTGGGTGGGTTGGCTCTTGCTGCTGTTGGATTTTCGCGTCGGAAGCCTGAACGGGTGCAGGAAG CTCGGCAGCACTTAGAGAGGCTTCAACTGGATGGATGCGACCCGTTGCCGATGCTGGGTTGCTTGGACCTCTTGCTCGGA GATGTGGGCCGCGCTCAGGAGCGTTTTCTGCGCAGTACAGATCCTCGAGTGAAGGACTGTCTTAACAGCCACCCTGGCGA TGAATTGGCTGCTTTTTGTGAGTACTGCCGCTCTTGGCTGCGAGGGGACGTGCTTCCCGGTTATAGGGATGTGGATGCTG AGGCCGTTGATCTAGAGGCTTGGTTTGCTGATCGGGATGTTCAGGCTTATGTGGAGCGCCTGGAACGCAGCGAAAATCGT GCTTCTTCTTTAGGTAAGGCCTTCTCAGGATCGTCTGTGAAGCAACCCTTCCCTTGGGCGCCTCTTGATCCCGATGGGAT TTTGCCCCTCTCTCTTGGTGGGCCTGATGTTGGTCAACCTGCAGCTGATCAGAGCTCTGATGAGTTTGCCAGCGATGGTA TGGCATGGATTGATCGTTTAGCAGATCTGCCACGCCCGACGCGGCCGGTGCTGATCGGTTCGGTTGTCTTTGCGGCCCTG ATTGCAGCCTTTGCAGGCTTCAGTTTGTTTGGCCAACGTCCTCGTACGTCAGTTAGTACGGCTGCTGATCAGCCTCAAGT CACAGCACCTCCTACAGCCACACTGCAAGAGGAGGTCCTCATGCCTCAAGTCCCTGTCAGCGCTGTGGTTGAGCCGCTTA CTTTGGAGCAGCCGAATGAGGCACAGCTCAAAGGCCTGCTTCAGGCCTGGCTCAGCAACAAGGCAGTCGTGCTTGCCGGT GGCAAGAGTGATGCACTGCCTGAGGTCGCAAGAGATCCATTGGTGCAGCGCGTGGCGCAAGAGCGTGCCAGGGATGCTGC TTTAGCTCAGACCCAGAAGGTTGTGGCCAGCATCAGCTCTGTAGAGGTGGTGAGTCGAACGCCGCAGCGTATTGAGCTGA ATGCCGTTGTGACCTATCGCGATCAACGCGTTGATGCTGCCGGCAAGGTTGTTGACCAAACGCCCCAAAAAGATCTCTCG GTGACTTACATCCTTGGTCGTGATCCCGATCGTTGGCGCCTGCATGAATACATCAGCGGCAAATAA
Upstream 100 bases:
>100_bases GACGACCGTCATTCGAGTCACGACTGTAATGGTCCGTTGATTAGGAATGGGCAAAATCCCTTCCAATGTCTAGAGTTTTA GGCCAATCGCTGCGCAGCTG
Downstream 100 bases:
>100_bases TCACTGTTCTGCCTAAGGGCTAGCCATTGCTTTTTACGATGAGCTCAAAGCCCTTGGCACGTAGGCACCATGTTTGAAGA ACTTTCAGCCCGCTTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDPPRRQAYETALLELSRDHPGE TAGLDVSPSREVAGLILLFEANSSHEVFHLASQGLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYEAAASLLH DGIQLLQRMGKLSEECHKLENDLDALLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTAPSPAPGGLDQSEFD NFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLERLQLDGCDPLPMLGCLDLLLG DVGRAQERFLRSTDPRVKDCLNSHPGDELAAFCEYCRSWLRGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERLERSENR ASSLGKAFSGSSVKQPFPWAPLDPDGILPLSLGGPDVGQPAADQSSDEFASDGMAWIDRLADLPRPTRPVLIGSVVFAAL IAAFAGFSLFGQRPRTSVSTAADQPQVTAPPTATLQEEVLMPQVPVSAVVEPLTLEQPNEAQLKGLLQAWLSNKAVVLAG GKSDALPEVARDPLVQRVAQERARDAALAQTQKVVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQTPQKDLS VTYILGRDPDRWRLHEYISGK
Sequences:
>Translated_661_residues MDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDPPRRQAYETALLELSRDHPGE TAGLDVSPSREVAGLILLFEANSSHEVFHLASQGLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYEAAASLLH DGIQLLQRMGKLSEECHKLENDLDALLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTAPSPAPGGLDQSEFD NFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLERLQLDGCDPLPMLGCLDLLLG DVGRAQERFLRSTDPRVKDCLNSHPGDELAAFCEYCRSWLRGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERLERSENR ASSLGKAFSGSSVKQPFPWAPLDPDGILPLSLGGPDVGQPAADQSSDEFASDGMAWIDRLADLPRPTRPVLIGSVVFAAL IAAFAGFSLFGQRPRTSVSTAADQPQVTAPPTATLQEEVLMPQVPVSAVVEPLTLEQPNEAQLKGLLQAWLSNKAVVLAG GKSDALPEVARDPLVQRVAQERARDAALAQTQKVVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQTPQKDLS VTYILGRDPDRWRLHEYISGK >Mature_661_residues MDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDPPRRQAYETALLELSRDHPGE TAGLDVSPSREVAGLILLFEANSSHEVFHLASQGLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYEAAASLLH DGIQLLQRMGKLSEECHKLENDLDALLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTAPSPAPGGLDQSEFD NFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLERLQLDGCDPLPMLGCLDLLLG DVGRAQERFLRSTDPRVKDCLNSHPGDELAAFCEYCRSWLRGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERLERSENR ASSLGKAFSGSSVKQPFPWAPLDPDGILPLSLGGPDVGQPAADQSSDEFASDGMAWIDRLADLPRPTRPVLIGSVVFAAL IAAFAGFSLFGQRPRTSVSTAADQPQVTAPPTATLQEEVLMPQVPVSAVVEPLTLEQPNEAQLKGLLQAWLSNKAVVLAG GKSDALPEVARDPLVQRVAQERARDAALAQTQKVVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQTPQKDLS VTYILGRDPDRWRLHEYISGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72435; Mature: 72435
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDP CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC PRRQAYETALLELSRDHPGETAGLDVSPSREVAGLILLFEANSSHEVFHLASQGLQPPQS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCC PTLGSEREADLALLLALACRAAAAEEQEQRRYEAAASLLHDGIQLLQRMGKLSEECHKLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLDALLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTAPSPAPGGLDQSEFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH NFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LQLDGCDPLPMLGCLDLLLGDVGRAQERFLRSTDPRVKDCLNSHPGDELAAFCEYCRSWL HHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHH RGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERLERSENRASSLGKAFSGSSVKQPFPWA CCCCCCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PLDPDGILPLSLGGPDVGQPAADQSSDEFASDGMAWIDRLADLPRPTRPVLIGSVVFAAL CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHH IAAFAGFSLFGQRPRTSVSTAADQPQVTAPPTATLQEEVLMPQVPVSAVVEPLTLEQPNE HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCH AQLKGLLQAWLSNKAVVLAGGKSDALPEVARDPLVQRVAQERARDAALAQTQKVVASISS HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQTPQKDLSVTYILGRDPDRWRLHEYISG HHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCC K C >Mature Secondary Structure MDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDP CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC PRRQAYETALLELSRDHPGETAGLDVSPSREVAGLILLFEANSSHEVFHLASQGLQPPQS HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCC PTLGSEREADLALLLALACRAAAAEEQEQRRYEAAASLLHDGIQLLQRMGKLSEECHKLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLDALLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTAPSPAPGGLDQSEFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH NFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLER HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LQLDGCDPLPMLGCLDLLLGDVGRAQERFLRSTDPRVKDCLNSHPGDELAAFCEYCRSWL HHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHH RGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERLERSENRASSLGKAFSGSSVKQPFPWA CCCCCCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PLDPDGILPLSLGGPDVGQPAADQSSDEFASDGMAWIDRLADLPRPTRPVLIGSVVFAAL CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHH IAAFAGFSLFGQRPRTSVSTAADQPQVTAPPTATLQEEVLMPQVPVSAVVEPLTLEQPNE HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCCH AQLKGLLQAWLSNKAVVLAGGKSDALPEVARDPLVQRVAQERARDAALAQTQKVVASISS HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQTPQKDLSVTYILGRDPDRWRLHEYISG HHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA