| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862340
Identifier: 33862340
GI number: 33862340
Start: 69418
End: 70527
Strand: Reverse
Name: 33862340
Synonym: PMT0067
Alternate gene names: NA
Gene position: 70527-69418 (Counterclockwise)
Preceding gene: 33862341
Following gene: 33862336
Centisome position: 2.93
GC content: 46.76
Gene sequence:
>1110_bases ATGGCAGCGAAACTCGGTACAACTAGAACATCACGACTGACTCCGGTGGACGGTGACTTCCAACAGCAGTACCTGGCCGC CGAGAAGGCCTATGGGGCAGGAAATTACGAAGCAGCTCAATCAATCTGTGAAGGCCTGCTAGGCCAACTAGAGCTGCAGC AGAAAGGACCTGAGCAAGAAGCAATGCTGGCCTGGCAGGCCTTTGTTGCTCTGCTAATGGGCCACGTCCAGCTCTACGGA ATAAACGATGTCCAGCAAGCCCAACACCACTACAACCTGGTTCTAGATAGCCAACCACAAGAGACTTTGAAAGAACTCGC CGAACAAGGCTTAGAACGATGCCAAGGCGAATTGCAACGAGAGACTGGAGATAGAGAAGAACATCCTCAAAGCCCGACCC CTAAACAATCCACAAAACACAAGCCAATAGCTCTAAAAGCTGAAGTCACAGAACCACGGCAAAGCCTGATTAATGATCCC TTCCTATCTACAAAGACCCCAAATATTAACGAGGCCAACAAAGCTAAACATCCTCAATCAGATCAACAGGCTAATCAACA AGAGACAAGGACATTGAGCAATGAAACGTCAGAGTCTCTGGCTGATCTGATTCGTGATCCCTTCCTATTTCCAGCCGCCC AAGCTTTAGCGACAGAAGCAGATCATTCTAAATCTACAGCCAAAATGGAATCAACATTCATTGCAGATAGCATGAAGCCT GAACAGATATCTAAGCAAAAAAACTACGCACAAAATACTGATCTTCAACAAAAGGTTCATGCGAAACAAGAACCATCGGC AACAGCGAAAGCCCTAGAAATTAAATCAGATCTCAATACAGAAACCGAAATAAGGCCAACAGCGAAATCAGAAGTAAACC CAATCAAAAAGCCTAAACAGGACACTTTCAAGCAAGCAATAATCCCCCCAGAGGCCATCTCACAAGCAACGAACAATGAC CTCCTAAATGATTCATTGTTGCGCGTGACCATGCCCTCTTACGCTGACCTTGCCAAGCAAGAGACCAGTCAATTGCAGTC AAAGAAGCGAACATCAGCAACGCTGACAACTCGCCTCAAAAACTTCTGGATGGTCTTAAGCCGCCGCTGA
Upstream 100 bases:
>100_bases CACCAAGTCTGCCAGCAGTCCAACTTGAACAGATCAGCCAAAGCATTGCCCCCGGCAAACCACCTGGATCTCTACACCTC GCGCAGGGCTGGAAAGTCCA
Downstream 100 bases:
>100_bases GCGGCGACGGCGTGTACGACCGGAAGGCACCTCTGCTGACTCAGGTTCAGATTGAGTCTTGACATTGGCTTGATCTGCAA CCTTCTTCGTAGTCGACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MAAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICEGLLGQLELQQKGPEQEAMLAWQAFVALLMGHVQLYG INDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQRETGDREEHPQSPTPKQSTKHKPIALKAEVTEPRQSLINDP FLSTKTPNINEANKAKHPQSDQQANQQETRTLSNETSESLADLIRDPFLFPAAQALATEADHSKSTAKMESTFIADSMKP EQISKQKNYAQNTDLQQKVHAKQEPSATAKALEIKSDLNTETEIRPTAKSEVNPIKKPKQDTFKQAIIPPEAISQATNND LLNDSLLRVTMPSYADLAKQETSQLQSKKRTSATLTTRLKNFWMVLSRR
Sequences:
>Translated_369_residues MAAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICEGLLGQLELQQKGPEQEAMLAWQAFVALLMGHVQLYG INDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQRETGDREEHPQSPTPKQSTKHKPIALKAEVTEPRQSLINDP FLSTKTPNINEANKAKHPQSDQQANQQETRTLSNETSESLADLIRDPFLFPAAQALATEADHSKSTAKMESTFIADSMKP EQISKQKNYAQNTDLQQKVHAKQEPSATAKALEIKSDLNTETEIRPTAKSEVNPIKKPKQDTFKQAIIPPEAISQATNND LLNDSLLRVTMPSYADLAKQETSQLQSKKRTSATLTTRLKNFWMVLSRR >Mature_368_residues AAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICEGLLGQLELQQKGPEQEAMLAWQAFVALLMGHVQLYGI NDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQRETGDREEHPQSPTPKQSTKHKPIALKAEVTEPRQSLINDPF LSTKTPNINEANKAKHPQSDQQANQQETRTLSNETSESLADLIRDPFLFPAAQALATEADHSKSTAKMESTFIADSMKPE QISKQKNYAQNTDLQQKVHAKQEPSATAKALEIKSDLNTETEIRPTAKSEVNPIKKPKQDTFKQAIIPPEAISQATNNDL LNDSLLRVTMPSYADLAKQETSQLQSKKRTSATLTTRLKNFWMVLSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41159; Mature: 41027
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICEGLLGQLELQQKGPEQE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH AMLAWQAFVALLMGHVQLYGINDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQR HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHH ETGDREEHPQSPTPKQSTKHKPIALKAEVTEPRQSLINDPFLSTKTPNINEANKAKHPQS HCCCHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCC DQQANQQETRTLSNETSESLADLIRDPFLFPAAQALATEADHSKSTAKMESTFIADSMKP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH EQISKQKNYAQNTDLQQKVHAKQEPSATAKALEIKSDLNTETEIRPTAKSEVNPIKKPKQ HHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHH DTFKQAIIPPEAISQATNNDLLNDSLLRVTMPSYADLAKQETSQLQSKKRTSATLTTRLK HHHHHHCCCHHHHHHHHCCCHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFWMVLSRR HHHHHHCCC >Mature Secondary Structure AAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICEGLLGQLELQQKGPEQE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH AMLAWQAFVALLMGHVQLYGINDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQR HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHH ETGDREEHPQSPTPKQSTKHKPIALKAEVTEPRQSLINDPFLSTKTPNINEANKAKHPQS HCCCHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHCCCCCC DQQANQQETRTLSNETSESLADLIRDPFLFPAAQALATEADHSKSTAKMESTFIADSMKP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH EQISKQKNYAQNTDLQQKVHAKQEPSATAKALEIKSDLNTETEIRPTAKSEVNPIKKPKQ HHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHH DTFKQAIIPPEAISQATNNDLLNDSLLRVTMPSYADLAKQETSQLQSKKRTSATLTTRLK HHHHHHCCCHHHHHHHHCCCHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFWMVLSRR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA