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The map label for this gene is sqdX [H]

Identifier: 33862322

GI number: 33862322

Start: 49755

End: 50984

Strand: Reverse

Name: sqdX [H]

Synonym: PMT0049

Alternate gene names: 33862322

Gene position: 50984-49755 (Counterclockwise)

Preceding gene: 33862323

Following gene: 33862316

Centisome position: 2.11

GC content: 55.45

Gene sequence:

>1230_bases
ATGTGTATCGGCCTGGACTTCGACCCAAGCGGAGGCCATCAAGAACCCCTCCTAAACAGCCTGCCCACACCACCCGCTGA
ACCAGTGAAGATCGCCTTTTTCACAGAGACCTTCCTCCCAAAAGTGGATGGAATCGTGACAAGACTCACCAAAACGGTGC
AGCACCTGGTTGAAGCCGGTGATGAAGTGATGGTGTTCTGCCCGGAAGGCTGTCCTAGCGAATACATGGGAGCCGAATTG
ATAGGAGTGCCAGCCATGCCACTGCCGCTCTATCCGGAACTGAAGCTTGCCCTGCCCAGACCAGCCGTTGCCGAAGCCCT
AGAAACCTTCGAACCCGATCTCGTACACGTTGTCAATCCAGCTGTACTAGGCCTTGGGGGAATTTGGCTCGCCAAAACCA
ACGGAATCCCTCTAATCGCTAGCTACCACACCCACCTCCCGAAATACCTAGAGCATTACGGCATGGGCATGCTGGAACCC
TTGCTCTGGGAACTTCTCAAGGCAGCCCACAATCAAGCAATACTCAATCTCTGCACCTCAACAGCAATGGTGGCTGAATT
GAGCGAGAAAGGGATCCAAAACACCGCCCTGTGGCAACGCGGCGTGGATACCGAACTCTTTCGACCGGAACTGCGCAACG
AAACCATGCGCTTACGCCTTTTGAACACAAACGACGATCAAGGTGCCCTGCTTCTCTACGTAGGGCGGCTCTCCGCCGAA
AAGCAAATCGAACGCATCAAACCTGTTCTCGATCGCATACCCGAGGCACGATTGGCCCTAGTAGGCGATGGACCTCACCG
CCAGCAACTGGAAAAAGCATTTGAAGGCACTGCTACAACATTTGTGGGCTATCTCGAAGGGGAAGAACTAGCCAGTGCAT
ATGCAAGCGGGGATGCCTTTCTATTCCCCTCAAGCACCGAAACCCTTGGGCTCGTTTTACTGGAAGCAATGGCAGCAGGT
TGTCCTGTAGTAGGAGCCAATCGTGGCGGAATCCCAGACATCATTACCGACGGAGTCAACGGCTGTCTCTACGAGCCGGA
TGGAGTGGATGGAGGGTCCACCAGCCTGATCAATGCAACCCGACGACTGCTCGGCAACGATCTCGAGCGTCAAGGTCTGC
GCAAAGCAGCCCGTCAAGAAGCCGAACGCTGGGGATGGGCCAGTGCCACGCAACAACTGCGGAGCTACTACAGAACAATC
CTCGGCCAACCCCTCAACCTGGCCGCCTGA

Upstream 100 bases:

>100_bases
AACTTGGACTCAAACCAACCACCCTCGACGATGGCCTACTTGCTGAAGTAGTCGATGTGGCAAAACGCTGGGCAGACCGC
TGCGACCGCAGTCGTATCCC

Downstream 100 bases:

>100_bases
GACCAAACATCAGTGTGTTCTGAGAGTCAGTGCGTTCAACTAGAGCGTGTGCGATTCCAAGCCTGAAGCACCTGCCGTGC
CATAGGCAACGCATGGACCG

Product: SqdX

Products: NA

Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MCIGLDFDPSGGHQEPLLNSLPTPPAEPVKIAFFTETFLPKVDGIVTRLTKTVQHLVEAGDEVMVFCPEGCPSEYMGAEL
IGVPAMPLPLYPELKLALPRPAVAEALETFEPDLVHVVNPAVLGLGGIWLAKTNGIPLIASYHTHLPKYLEHYGMGMLEP
LLWELLKAAHNQAILNLCTSTAMVAELSEKGIQNTALWQRGVDTELFRPELRNETMRLRLLNTNDDQGALLLYVGRLSAE
KQIERIKPVLDRIPEARLALVGDGPHRQQLEKAFEGTATTFVGYLEGEELASAYASGDAFLFPSSTETLGLVLLEAMAAG
CPVVGANRGGIPDIITDGVNGCLYEPDGVDGGSTSLINATRRLLGNDLERQGLRKAARQEAERWGWASATQQLRSYYRTI
LGQPLNLAA

Sequences:

>Translated_409_residues
MCIGLDFDPSGGHQEPLLNSLPTPPAEPVKIAFFTETFLPKVDGIVTRLTKTVQHLVEAGDEVMVFCPEGCPSEYMGAEL
IGVPAMPLPLYPELKLALPRPAVAEALETFEPDLVHVVNPAVLGLGGIWLAKTNGIPLIASYHTHLPKYLEHYGMGMLEP
LLWELLKAAHNQAILNLCTSTAMVAELSEKGIQNTALWQRGVDTELFRPELRNETMRLRLLNTNDDQGALLLYVGRLSAE
KQIERIKPVLDRIPEARLALVGDGPHRQQLEKAFEGTATTFVGYLEGEELASAYASGDAFLFPSSTETLGLVLLEAMAAG
CPVVGANRGGIPDIITDGVNGCLYEPDGVDGGSTSLINATRRLLGNDLERQGLRKAARQEAERWGWASATQQLRSYYRTI
LGQPLNLAA
>Mature_409_residues
MCIGLDFDPSGGHQEPLLNSLPTPPAEPVKIAFFTETFLPKVDGIVTRLTKTVQHLVEAGDEVMVFCPEGCPSEYMGAEL
IGVPAMPLPLYPELKLALPRPAVAEALETFEPDLVHVVNPAVLGLGGIWLAKTNGIPLIASYHTHLPKYLEHYGMGMLEP
LLWELLKAAHNQAILNLCTSTAMVAELSEKGIQNTALWQRGVDTELFRPELRNETMRLRLLNTNDDQGALLLYVGRLSAE
KQIERIKPVLDRIPEARLALVGDGPHRQQLEKAFEGTATTFVGYLEGEELASAYASGDAFLFPSSTETLGLVLLEAMAAG
CPVVGANRGGIPDIITDGVNGCLYEPDGVDGGSTSLINATRRLLGNDLERQGLRKAARQEAERWGWASATQQLRSYYRTI
LGQPLNLAA

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 44455; Mature: 44455

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIGLDFDPSGGHQEPLLNSLPTPPAEPVKIAFFTETFLPKVDGIVTRLTKTVQHLVEAG
CEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
DEVMVFCPEGCPSEYMGAELIGVPAMPLPLYPELKLALPRPAVAEALETFEPDLVHVVNP
CCEEEECCCCCCHHHCCCCEECCCCCCCCCCCCHHEECCCHHHHHHHHHCCCCHHHHHCH
AVLGLGGIWLAKTNGIPLIASYHTHLPKYLEHYGMGMLEPLLWELLKAAHNQAILNLCTS
HHHCCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAMVAELSEKGIQNTALWQRGVDTELFRPELRNETMRLRLLNTNDDQGALLLYVGRLSAE
HHHHHHHHHCCCHHHHHHHCCCCHHHHCHHHCCCEEEEEEECCCCCCCEEEEEEECCCHH
KQIERIKPVLDRIPEARLALVGDGPHRQQLEKAFEGTATTFVGYLEGEELASAYASGDAF
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHEEEECCHHHHHHHHHCCCEE
LFPSSTETLGLVLLEAMAAGCPVVGANRGGIPDIITDGVNGCLYEPDGVDGGSTSLINAT
ECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCEECCCCCCCCCHHHHHHH
RRLLGNDLERQGLRKAARQEAERWGWASATQQLRSYYRTILGQPLNLAA
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCIGLDFDPSGGHQEPLLNSLPTPPAEPVKIAFFTETFLPKVDGIVTRLTKTVQHLVEAG
CEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
DEVMVFCPEGCPSEYMGAELIGVPAMPLPLYPELKLALPRPAVAEALETFEPDLVHVVNP
CCEEEECCCCCCHHHCCCCEECCCCCCCCCCCCHHEECCCHHHHHHHHHCCCCHHHHHCH
AVLGLGGIWLAKTNGIPLIASYHTHLPKYLEHYGMGMLEPLLWELLKAAHNQAILNLCTS
HHHCCCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAMVAELSEKGIQNTALWQRGVDTELFRPELRNETMRLRLLNTNDDQGALLLYVGRLSAE
HHHHHHHHHCCCHHHHHHHCCCCHHHHCHHHCCCEEEEEEECCCCCCCEEEEEEECCCHH
KQIERIKPVLDRIPEARLALVGDGPHRQQLEKAFEGTATTFVGYLEGEELASAYASGDAF
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHEEEECCHHHHHHHHHCCCEE
LFPSSTETLGLVLLEAMAAGCPVVGANRGGIPDIITDGVNGCLYEPDGVDGGSTSLINAT
ECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCEECCCCCCCCCHHHHHHH
RRLLGNDLERQGLRKAARQEAERWGWASATQQLRSYYRTILGQPLNLAA
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10531370; 9634230; 12218036 [H]