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The map label for this gene is ydiK [H]

Identifier: 326423645

GI number: 326423645

Start: 6115

End: 7197

Strand: Reverse

Name: ydiK [H]

Synonym: NA

Alternate gene names: 326423645

Gene position: 7197-6115 (Counterclockwise)

Preceding gene: 326423646

Following gene: 27363495

Centisome position: 0.22

GC content: 43.58

Gene sequence:

>1083_bases
TTGAATAATTCAAATGAGAACTTAGAAAAGGTATTAGTGAAAGCATTTAGTACTTCATTGATACGATTCGCAGCAATTAC
GCTTATTGTTATTGTCTGTTGGTGGGCGTTTTTGCCATTTTTACCTATTTTACTTTGGGCGCTGGTATTGGCTATTGCAC
TTTACCCTCTTAAGTTGGCTGTTGAACGTAAACTGGGCTTAAGATCTAGCCGTTCAGCTACTTTAGTCGCGGTGATTGGC
GTGCTTGTACTTGGAACGCCTACCGCTATGGTTGGTAACTCATTTGCGTCTAAAACGTTAGAAGCACTCGATTCTTATCG
AAATGGCACACTAGCCGTATCGAAGCCAACAGACAGCGTAAAAGAATGGCCATTAGTCGGGGAAAAAATATATGCTGCCT
GGGATGAAGCCGCTGTCAATCTGCCTGTTTTCATAGACAAGCATCAGCCTCAAATAAAAAGCATTTTCGGTTGGGTGTTC
GATAGTGCGGCGGGCGCAGCTAAGAGCGTATTTGTCTTGATAGGTGCTGTGATCATTGCTGGGATAATGTTAGCTTGGGC
TGAACCCGCATCAGCATCAATACGTAAGATTTTTATAAGTTTTACAGATCCGATCAAAGGACCTTCGCTGCATAAATTAA
CAACCGCAACCCTAAGGCAGGTCGCTGTTGGCATTATCGGAATCGCATTTTTAACAGCAATGATATTTGGTGCTATCGTA
GGGTTAGCAGGCGTTCCAGCGGCTTCTCTGTTTACATTAATCGCCTTAGTTTTTGCTATCGTTCAGCTCCCTGTGACCGT
CGTGGCTCTGGTCGCTGTTGCAGTCTTGTGGTCAGGAGATAGTGGAACAGCACACAATGCTATCTTCACAGTGTTAATTA
TTGCTGCAAGCTTTATAGATAATTTCCTAAAACCGATTATTCTTGGAAGAGGGTTGGATGTTCCAATGCCTATAATACTC
ATTGGCGCTGTAGGTGGGGTCATGTCTGGAGGAATACTGGGTATGTTCGTTGGTGCGGCATTTTTCGCTACAGGATATCA
AGTTTTTATGCAATGGGTAGAGTCAGAAAGCAAGCAAGTCTGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:
NA

Sequences:

>Translated_360_residues
MNNSNENLEKVLVKAFSTSLIRFAAITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLAVERKLGLRSSRSATLVAVIG
VLVLGTPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSVKEWPLVGEKIYAAWDEAAVNLPVFIDKHQPQIKSIFGWVF
DSAAGAAKSVFVLIGAVIIAGIMLAWAEPASASIRKIFISFTDPIKGPSLHKLTTATLRQVAVGIIGIAFLTAMIFGAIV
GLAGVPAASLFTLIALVFAIVQLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFIDNFLKPIILGRGLDVPMPIIL
IGAVGGVMSGGILGMFVGAAFFATGYQVFMQWVESESKQV
>Mature_360_residues
MNNSNENLEKVLVKAFSTSLIRFAAITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLAVERKLGLRSSRSATLVAVIG
VLVLGTPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSVKEWPLVGEKIYAAWDEAAVNLPVFIDKHQPQIKSIFGWVF
DSAAGAAKSVFVLIGAVIIAGIMLAWAEPASASIRKIFISFTDPIKGPSLHKLTTATLRQVAVGIIGIAFLTAMIFGAIV
GLAGVPAASLFTLIALVFAIVQLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFIDNFLKPIILGRGLDVPMPIIL
IGAVGGVMSGGILGMFVGAAFFATGYQVFMQWVESESKQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=333, Percent_Identity=24.9249249249249, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38123; Mature: 38123

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSNENLEKVLVKAFSTSLIRFAAITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERKLGLRSSRSATLVAVIGVLVLGTPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSV
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHH
KEWPLVGEKIYAAWDEAAVNLPVFIDKHQPQIKSIFGWVFDSAAGAAKSVFVLIGAVIIA
HHCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
GIMLAWAEPASASIRKIFISFTDPIKGPSLHKLTTATLRQVAVGIIGIAFLTAMIFGAIV
HHHHHHCCCCHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAGVPAASLFTLIALVFAIVQLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFID
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NFLKPIILGRGLDVPMPIILIGAVGGVMSGGILGMFVGAAFFATGYQVFMQWVESESKQV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNSNENLEKVLVKAFSTSLIRFAAITLIVIVCWWAFLPFLPILLWALVLAIALYPLKLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERKLGLRSSRSATLVAVIGVLVLGTPTAMVGNSFASKTLEALDSYRNGTLAVSKPTDSV
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHH
KEWPLVGEKIYAAWDEAAVNLPVFIDKHQPQIKSIFGWVFDSAAGAAKSVFVLIGAVIIA
HHCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
GIMLAWAEPASASIRKIFISFTDPIKGPSLHKLTTATLRQVAVGIIGIAFLTAMIFGAIV
HHHHHHCCCCHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAGVPAASLFTLIALVFAIVQLPVTVVALVAVAVLWSGDSGTAHNAIFTVLIIAASFID
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
NFLKPIILGRGLDVPMPIILIGAVGGVMSGGILGMFVGAAFFATGYQVFMQWVESESKQV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]