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The map label for this gene is 27363495

Identifier: 27363495

GI number: 27363495

Start: 5621

End: 5965

Strand: Reverse

Name: 27363495

Synonym: VV1_0005

Alternate gene names: NA

Gene position: 5965-5621 (Counterclockwise)

Preceding gene: 326423645

Following gene: 27363494

Centisome position: 0.18

GC content: 46.67

Gene sequence:

>345_bases
ATGATTCTAACATTACCTGACCGCGTTGAGCGACGTCGTATCACTAAAAAGATGCATAAGACTAAGGATAAAGACCATTA
CCGACGCTTGAATGCCATATTGCTTCTTTACCAAGGACATTCTGTTACCACAGTCTCGAAGATTCTGGTTTCAGCTCGGT
CTTCTATAGGACGCTGGATTCACTGGTACACGAAATGCGGCATCGATGGCTTGGAAAGCTCAACTCGAGGTAGAGCCGCG
ACGCTCCCATTTCTTCAAATTGCCGCTGTATTGACAGCTTTAATCGCACTGAATCCTCAAAGTCTGGGATATCAGCGTTC
ACGTTGGGATCGTTTGGTCCGGTGA

Upstream 100 bases:

>100_bases
ATGTAGATCATTGGTGTGTAAAAAAGAAGGGAACTCGGTACCGTTTGAGCGATCTGATCAGTAGCCAAACATATAAACCC
GCAACCGTTACCGAGTTCCC

Downstream 100 bases:

>100_bases
CCTCCATGGTAAGATCACCGAAAAATGAAGGACAACATGAACTTATTCAGCGCCTGTAAAGAATATCCTCATATGGATAT
GAATACCGCTGGCCGTGATG

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: ISO-IS200 39 kDa protein [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MILTLPDRVERRRITKKMHKTKDKDHYRRLNAILLLYQGHSVTTVSKILVSARSSIGRWIHWYTKCGIDGLESSTRGRAA
TLPFLQIAAVLTALIALNPQSLGYQRSRWDRLVR

Sequences:

>Translated_114_residues
MILTLPDRVERRRITKKMHKTKDKDHYRRLNAILLLYQGHSVTTVSKILVSARSSIGRWIHWYTKCGIDGLESSTRGRAA
TLPFLQIAAVLTALIALNPQSLGYQRSRWDRLVR
>Mature_114_residues
MILTLPDRVERRRITKKMHKTKDKDHYRRLNAILLLYQGHSVTTVSKILVSARSSIGRWIHWYTKCGIDGLESSTRGRAA
TLPFLQIAAVLTALIALNPQSLGYQRSRWDRLVR

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 13156; Mature: 13156

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTLPDRVERRRITKKMHKTKDKDHYRRLNAILLLYQGHSVTTVSKILVSARSSIGRWI
CEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
HWYTKCGIDGLESSTRGRAATLPFLQIAAVLTALIALNPQSLGYQRSRWDRLVR
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHCC
>Mature Secondary Structure
MILTLPDRVERRRITKKMHKTKDKDHYRRLNAILLLYQGHSVTTVSKILVSARSSIGRWI
CEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH
HWYTKCGIDGLESSTRGRAATLPFLQIAAVLTALIALNPQSLGYQRSRWDRLVR
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]