| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267240
Identifier: 32267240
GI number: 32267240
Start: 1667185
End: 1668099
Strand: Direct
Name: 32267240
Synonym: HH1741
Alternate gene names: NA
Gene position: 1667185-1668099 (Clockwise)
Preceding gene: 32267238
Following gene: 32267241
Centisome position: 92.67
GC content: 31.26
Gene sequence:
>915_bases ATGTTATTTTGCTATAAAGGCATATTATTAATGAAGTTATTTGAAAAAGTTTATATAGAGCTAAGTGATTATTGCGCTCT CTCTTGTGGATTCTGCCCAAGCCATACGCTCTCTAAAAGGCGTGGCACAATGGATTTAAAACTTTTTGAATCTATATGCG CGCAGATTCAAGGCAAAACACGAAGAGTGCATTTGCATTTGTTAGGCGATCCTTTAAGCGTGCAACATTTTGAAATGTAT GTAAAAATACTTAGAAAGTATCATTTAAAAGTAGATTTGGTAACTACAGGATTATTTTTACGCAAAAAGCATTTTGAATT ACTTTTAAATGAACCATTTGTGCAAGTTTCATTTTCTCTAAGTGCATTTTTAGCAAATCCTCATCAATTCAAAAAGGCAC ATTTAAAGCGTATTTTAGATTTTTGTGCCTTTAATATACATTCTCAATCACCTATTTTTGTGAATTTACGATTTCATAGT AATGATATTTTGCGCCGAGAAAACTATTTTGTGCGAATGCTTAATGAAATTGGAGCATATTTTGGTTTTTCTAATATTGA TTTGAAGCAAGAGCGTTTAAAGCTTGGAAAAAAAGTATTTCTTAATCCCACACATTCTTTTGATTGGGAGATTCAAAAAG ATACATTTGCACAGCCATATAATATCAATAATAAATCATCTATAAAGCCATTATGTTATGGCGCACAAAAGCAAATTGGG ATTTTGAGTAATGGAGAACTTGTGCCTTGTTGCATAGATTATAATGCACAGGCAAGTTTTGGAAATTTAAAAGAGCAGAA TTTGGCAGATATACTAGATTCTAAAGCATTTATAGCATTTAGTCTAAATTTGAGACAAGGCAATATACCTTGCGAATTGT GCCAAAAATGTGGATATAGATTAATTTTGCAATAA
Upstream 100 bases:
>100_bases TGTATATATATAAAAAAAATTATGATTTTATCTGTAATATTCTGCTTATATAGTTTAATATAGTATTATTTTATAAAATG AGTTTAAGAAAATAATATTA
Downstream 100 bases:
>100_bases TTATAATTGAAAATGGAATTATTTTTGCTAGAAGTCCTTGAAAGCTAGATTCTAAAAGGAATTAGAAGAGTCACTAAAGG GATTTTATGAGAAAACTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; Radical Sam Domain Protein; Radical SAM Family Protein; Pyruvate Formate-Lyase Activating; Molybdenum Cofactor Biosynthesis Protein; Fe-S Oxidoreductase; Radical SAM
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MLFCYKGILLMKLFEKVYIELSDYCALSCGFCPSHTLSKRRGTMDLKLFESICAQIQGKTRRVHLHLLGDPLSVQHFEMY VKILRKYHLKVDLVTTGLFLRKKHFELLLNEPFVQVSFSLSAFLANPHQFKKAHLKRILDFCAFNIHSQSPIFVNLRFHS NDILRRENYFVRMLNEIGAYFGFSNIDLKQERLKLGKKVFLNPTHSFDWEIQKDTFAQPYNINNKSSIKPLCYGAQKQIG ILSNGELVPCCIDYNAQASFGNLKEQNLADILDSKAFIAFSLNLRQGNIPCELCQKCGYRLILQ
Sequences:
>Translated_304_residues MLFCYKGILLMKLFEKVYIELSDYCALSCGFCPSHTLSKRRGTMDLKLFESICAQIQGKTRRVHLHLLGDPLSVQHFEMY VKILRKYHLKVDLVTTGLFLRKKHFELLLNEPFVQVSFSLSAFLANPHQFKKAHLKRILDFCAFNIHSQSPIFVNLRFHS NDILRRENYFVRMLNEIGAYFGFSNIDLKQERLKLGKKVFLNPTHSFDWEIQKDTFAQPYNINNKSSIKPLCYGAQKQIG ILSNGELVPCCIDYNAQASFGNLKEQNLADILDSKAFIAFSLNLRQGNIPCELCQKCGYRLILQ >Mature_304_residues MLFCYKGILLMKLFEKVYIELSDYCALSCGFCPSHTLSKRRGTMDLKLFESICAQIQGKTRRVHLHLLGDPLSVQHFEMY VKILRKYHLKVDLVTTGLFLRKKHFELLLNEPFVQVSFSLSAFLANPHQFKKAHLKRILDFCAFNIHSQSPIFVNLRFHS NDILRRENYFVRMLNEIGAYFGFSNIDLKQERLKLGKKVFLNPTHSFDWEIQKDTFAQPYNINNKSSIKPLCYGAQKQIG ILSNGELVPCCIDYNAQASFGNLKEQNLADILDSKAFIAFSLNLRQGNIPCELCQKCGYRLILQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35192; Mature: 35192
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFCYKGILLMKLFEKVYIELSDYCALSCGFCPSHTLSKRRGTMDLKLFESICAQIQGKT CEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCC RRVHLHLLGDPLSVQHFEMYVKILRKYHLKVDLVTTGLFLRKKHFELLLNEPFVQVSFSL EEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEH SAFLANPHQFKKAHLKRILDFCAFNIHSQSPIFVNLRFHSNDILRRENYFVRMLNEIGAY HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH FGFSNIDLKQERLKLGKKVFLNPTHSFDWEIQKDTFAQPYNINNKSSIKPLCYGAQKQIG CCCCCCCCHHHHHHCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCEE ILSNGELVPCCIDYNAQASFGNLKEQNLADILDSKAFIAFSLNLRQGNIPCELCQKCGYR EECCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHCCCE LILQ EECC >Mature Secondary Structure MLFCYKGILLMKLFEKVYIELSDYCALSCGFCPSHTLSKRRGTMDLKLFESICAQIQGKT CEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCC RRVHLHLLGDPLSVQHFEMYVKILRKYHLKVDLVTTGLFLRKKHFELLLNEPFVQVSFSL EEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEH SAFLANPHQFKKAHLKRILDFCAFNIHSQSPIFVNLRFHSNDILRRENYFVRMLNEIGAY HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH FGFSNIDLKQERLKLGKKVFLNPTHSFDWEIQKDTFAQPYNINNKSSIKPLCYGAQKQIG CCCCCCCCHHHHHHCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCEE ILSNGELVPCCIDYNAQASFGNLKEQNLADILDSKAFIAFSLNLRQGNIPCELCQKCGYR EECCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHCCCE LILQ EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA