| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is 32267241
Identifier: 32267241
GI number: 32267241
Start: 1668186
End: 1669325
Strand: Direct
Name: 32267241
Synonym: HH1742
Alternate gene names: NA
Gene position: 1668186-1669325 (Clockwise)
Preceding gene: 32267240
Following gene: 32267242
Centisome position: 92.72
GC content: 37.19
Gene sequence:
>1140_bases ATGAGAAAACTAATTGTGATTGTTGTGTGTGTGCTTAGCTTAAGCGAAATTGCAAATGCAAATAATTTAGCGCGTTATCT TCTTGCAGGACACCCAAGTGGACATATGGGTATATATTACCAATATATGACAAGTGCGGCTCCTGGTTTTCTTGATGCAA ATGTTTCGCTTGCTTATCAAACACAAAGACTTCGGGGATTGGCATTTGGTGGTTCTATGTGGGCTGCAACAAAGCTTTTT CAAGTGCATAATGGGGATTTCTCAAAAGTGAAAGAGAATTATATTCTTACAGAAGCGTATGCAAGCTTTGTCAATCCAAA TCGTATAAGTATGTATGCAGGACGATTTAAAACTGATAGTGAATGGATTAAACATTATACACAAGGTGCAGCGGTAACTT ATGAAGATGTAGAGAATCTTAAAGTAGATTTTATTTGGGCTTGGAAAAATGCCTATGTTACAGACTATCGTATGGACAGG TTTAGGAATCCTTTTGGTGGTATGGGGGCAATGTATCTTGGGGCAACAATTACTTTACCAGAATCTCCATTACAAATTAC TCCTTATGTATATGCCGCACCGGGTGATTTTACTTCATTTGCATTAAAAGTGCTTGTTGCGGTGCCTGCTGGTAATGCTA TACTTTATGGGAAAATGCACTTTTTATCTTTTGTGAGTGCAAATAAAGATAGAGTGATTGATACCCAAACTGCAGGTGGT GATGGTGGTTTTGTGTGGCTAGAGGGTGGAGCAAAATGGCTTGGTTTAAACACAGGTGGAGGTGTAATTTCAGTATCTCA AAATGGTGCAAGAGGTATAGATTCTTTTGGGCAGAGCAGTTATTTTGAACGAAGAGAAGGATTATTTTATAATAATGCAA CAACTTTGTATGGCTTTTTAGAGTATGATTTAAAGCAGTATGTGCAGCTTGATGGAGCTATTCGCCATACAACTATTGGT TCTAAAAATATCTTTAATTGGGAAGTAGGCATCACTTCCGAGCCTCAAAATAATATTAAAATAGGAGCTAAAATTATAGG TATGATAAATAATGCCGATTTTACGCTGGATAATTCAATTTTTGCCGCTGATGGCAAGAATTATCTGCTAACCCGTGTTT TTGGACGAGTTAGTTTTTAA
Upstream 100 bases:
>100_bases TAATTTTGCAATAATTATAATTGAAAATGGAATTATTTTTGCTAGAAGTCCTTGAAAGCTAGATTCTAAAAGGAATTAGA AGAGTCACTAAAGGGATTTT
Downstream 100 bases:
>100_bases TCTATCAAGGAGAAAATAATGAAAAAATATTATATATCGCTTGCTGTAGTATCAGCTATAGCAATGAGTGCAAACGCAGT AGAAGTTAACCCCTTTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRKLIVIVVCVLSLSEIANANNLARYLLAGHPSGHMGIYYQYMTSAAPGFLDANVSLAYQTQRLRGLAFGGSMWAATKLF QVHNGDFSKVKENYILTEAYASFVNPNRISMYAGRFKTDSEWIKHYTQGAAVTYEDVENLKVDFIWAWKNAYVTDYRMDR FRNPFGGMGAMYLGATITLPESPLQITPYVYAAPGDFTSFALKVLVAVPAGNAILYGKMHFLSFVSANKDRVIDTQTAGG DGGFVWLEGGAKWLGLNTGGGVISVSQNGARGIDSFGQSSYFERREGLFYNNATTLYGFLEYDLKQYVQLDGAIRHTTIG SKNIFNWEVGITSEPQNNIKIGAKIIGMINNADFTLDNSIFAADGKNYLLTRVFGRVSF
Sequences:
>Translated_379_residues MRKLIVIVVCVLSLSEIANANNLARYLLAGHPSGHMGIYYQYMTSAAPGFLDANVSLAYQTQRLRGLAFGGSMWAATKLF QVHNGDFSKVKENYILTEAYASFVNPNRISMYAGRFKTDSEWIKHYTQGAAVTYEDVENLKVDFIWAWKNAYVTDYRMDR FRNPFGGMGAMYLGATITLPESPLQITPYVYAAPGDFTSFALKVLVAVPAGNAILYGKMHFLSFVSANKDRVIDTQTAGG DGGFVWLEGGAKWLGLNTGGGVISVSQNGARGIDSFGQSSYFERREGLFYNNATTLYGFLEYDLKQYVQLDGAIRHTTIG SKNIFNWEVGITSEPQNNIKIGAKIIGMINNADFTLDNSIFAADGKNYLLTRVFGRVSF >Mature_379_residues MRKLIVIVVCVLSLSEIANANNLARYLLAGHPSGHMGIYYQYMTSAAPGFLDANVSLAYQTQRLRGLAFGGSMWAATKLF QVHNGDFSKVKENYILTEAYASFVNPNRISMYAGRFKTDSEWIKHYTQGAAVTYEDVENLKVDFIWAWKNAYVTDYRMDR FRNPFGGMGAMYLGATITLPESPLQITPYVYAAPGDFTSFALKVLVAVPAGNAILYGKMHFLSFVSANKDRVIDTQTAGG DGGFVWLEGGAKWLGLNTGGGVISVSQNGARGIDSFGQSSYFERREGLFYNNATTLYGFLEYDLKQYVQLDGAIRHTTIG SKNIFNWEVGITSEPQNNIKIGAKIIGMINNADFTLDNSIFAADGKNYLLTRVFGRVSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41922; Mature: 41922
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLIVIVVCVLSLSEIANANNLARYLLAGHPSGHMGIYYQYMTSAAPGFLDANVSLAYQ CCHHHHHHHHHHHHHHHCCHHHHEEHHEECCCCCCCEEEEEEECCCCCCEEECCEEEEEE TQRLRGLAFGGSMWAATKLFQVHNGDFSKVKENYILTEAYASFVNPNRISMYAGRFKTDS HHHHEEEEECCCHHHHEEEEEECCCCHHHHHHCEEEEHHHHHHCCCCEEEEEECCCCCCH EWIKHYTQGAAVTYEDVENLKVDFIWAWKNAYVTDYRMDRFRNPFGGMGAMYLGATITLP HHHHHHHCCCEEEECCCCCCEEEEEEEECCCEEEEEEHHHHCCCCCCCCHHHCCEEEECC ESPLQITPYVYAAPGDFTSFALKVLVAVPAGNAILYGKMHFLSFVSANKDRVIDTQTAGG CCCCEECCEEEECCCCHHHHEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEEEECCCC DGGFVWLEGGAKWLGLNTGGGVISVSQNGARGIDSFGQSSYFERREGLFYNNATTLYGFL CCCEEEEECCCEEEEEECCCCEEEECCCCCCCCHHCCCHHHHHHHCCEEECCCEEEEEHH EYDLKQYVQLDGAIRHTTIGSKNIFNWEVGITSEPQNNIKIGAKIIGMINNADFTLDNSI HHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCEEECCCE FAADGKNYLLTRVFGRVSF EEECCCCEEEEEHHHHCCC >Mature Secondary Structure MRKLIVIVVCVLSLSEIANANNLARYLLAGHPSGHMGIYYQYMTSAAPGFLDANVSLAYQ CCHHHHHHHHHHHHHHHCCHHHHEEHHEECCCCCCCEEEEEEECCCCCCEEECCEEEEEE TQRLRGLAFGGSMWAATKLFQVHNGDFSKVKENYILTEAYASFVNPNRISMYAGRFKTDS HHHHEEEEECCCHHHHEEEEEECCCCHHHHHHCEEEEHHHHHHCCCCEEEEEECCCCCCH EWIKHYTQGAAVTYEDVENLKVDFIWAWKNAYVTDYRMDRFRNPFGGMGAMYLGATITLP HHHHHHHCCCEEEECCCCCCEEEEEEEECCCEEEEEEHHHHCCCCCCCCHHHCCEEEECC ESPLQITPYVYAAPGDFTSFALKVLVAVPAGNAILYGKMHFLSFVSANKDRVIDTQTAGG CCCCEECCEEEECCCCHHHHEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEEEECCCC DGGFVWLEGGAKWLGLNTGGGVISVSQNGARGIDSFGQSSYFERREGLFYNNATTLYGFL CCCEEEEECCCEEEEEECCCCEEEECCCCCCCCHHCCCHHHHHHHCCEEECCCEEEEEHH EYDLKQYVQLDGAIRHTTIGSKNIFNWEVGITSEPQNNIKIGAKIIGMINNADFTLDNSI HHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCEEECCCE FAADGKNYLLTRVFGRVSF EEECCCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA