Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266686

Identifier: 32266686

GI number: 32266686

Start: 1153450

End: 1154892

Strand: Direct

Name: 32266686

Synonym: HH1187

Alternate gene names: NA

Gene position: 1153450-1154892 (Clockwise)

Preceding gene: 32266685

Following gene: 32266687

Centisome position: 64.11

GC content: 37.98

Gene sequence:

>1443_bases
ATGAAAAAATGGCTTATATTGCTATGTATGATAAGTGCATTTGTAGGGTGTGGTAATGAAGAAAATGAGATAAAGCAAAA
CCTGCAAGAGAAAAATCAAGAAGTGCAACAAGAAAATGTGAGCCAAACCAAAGAATCACAAAATCAATCCAAAGAAACTT
TTATCAATGAAGAAAGAAGTTTGCGCTCACAAAGTCCTCAAAAATGGTTAGAAAAATATGATGTTAATGCTAAAGATTCC
AATGGAGAGACTTTGCTTATGTTTTTTGCAGCCTATGGGAGTGATGATGAGGTGAAATATCTTCTTGCACAAGGTGCAGA
TGTGAATGCTACAGATAAGCAAGGACAGAGTGCATTATTTTACGCGCTTTTTTGTGGAGCAGAGGGTTGTATATTTGATA
AGGTTAAAACTCTTGTAGAAGCTGGGGCTAATGTAAATGCGAAAAATGCACAAGGCGATAGTGTGTTGCGCGTGGCACTT
GGTTCAAGTGAGGAGATAGAGGAATACTTAAAAAGCAAGGGCGCACTAGATTCTAAAAGCTTTGATGAGAGCGTAAATAA
TTTGAGTGAGCAGGAGATAAGCCGCATTGCTAATCCTCGTTTGGTAGAGGTAGTGCGCACATATAATGGCAAAGTGGGTA
TAAAGTGTATAGCAGAGCTTTTGCAGAGTGATAACATTGATGAAGTTTTAAAAGAGGAACAAGAAGTTTCTAAAGATATA
TATGCGTATGAAGGACAGAGTGCATTGCTTCTTGCTGCAAAATTTGGCTATGATGAGTTAGTAGCTACACTATTAGAGCT
TGGAGCAAATCCAAATGTTATAGGATATTATACAACGCCACTCCTTGAGGCGGCTACAAACAATTATTATCATATCTCAA
AATTGTTGCTTGAACACGGAGCAGATGTAAATTTACGCGCACAAGATAATGGAACTACGCCTATTATTGCGCTTGTAGAG
GGTAAAAGCAAAGGACTTTTATCTATTAAAGATGAAAAAGAGCGCACAAAAGAGGAAGATAAAGCCCGCATACCGCTTTT
AGAATTGCTTATAAAATCTGGGGGTGATGTCAATGCACAAGATTTTGCACGTGAGGGGGATAACATAAATGCACTCTTTT
CAGCATTAGAGCTAGAGAGGGGGAATCTCGCAGTGCTTTTAATACAATCAGGCGCAGATATCAAAGATGAAAGGTATCCA
CCTCTAAATGACGCGGTCAAATATGGGTTAGTCAATGCAGTAGAGGCATTACTCAAAGCAGGTGCAAATCCTATGCAAAA
AGATTTATTTTATCAAACAAGTGCATTAGATATTATTGGTGAGAATAAGCTTGAACGAATGAGTAGTGAATATGCAAGAA
CACTTTTTCATTCTTTGGAGCCAGAGAAGCAATCGCGTATCAAAGAGCTTATAAACCAAGCGATAGAGACTATAAATCCC
TAA

Upstream 100 bases:

>100_bases
CTCTCTTTTGTTGCATTATTATTTTCGAGTGATTTTAGAGCAAATTCTGTTAAAATTTTGGTAATATTTAAATTCAAAAT
GAAATAAAAAAGGAGTGGGA

Downstream 100 bases:

>100_bases
AATACGAGAAGGAAGAGATATTGTGCGAACATAAGGCACGTAAAGCAGAGGCAAAGCCACGCATTTTGATTCTTGCAGCA
GCAAATATTAATACTTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERSLRSQSPQKWLEKYDVNAKDS
NGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALFYALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVAL
GSSEEIEEYLKSKGALDSKSFDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI
YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHGADVNLRAQDNGTTPIIALVE
GKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQDFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYP
PLNDAVKYGLVNAVEALLKAGANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP

Sequences:

>Translated_480_residues
MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERSLRSQSPQKWLEKYDVNAKDS
NGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALFYALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVAL
GSSEEIEEYLKSKGALDSKSFDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI
YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHGADVNLRAQDNGTTPIIALVE
GKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQDFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYP
PLNDAVKYGLVNAVEALLKAGANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP
>Mature_480_residues
MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERSLRSQSPQKWLEKYDVNAKDS
NGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALFYALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVAL
GSSEEIEEYLKSKGALDSKSFDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI
YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHGADVNLRAQDNGTTPIIALVE
GKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQDFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYP
PLNDAVKYGLVNAVEALLKAGANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI38683816, Length=373, Percent_Identity=29.4906166219839, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI38683807, Length=373, Percent_Identity=29.4906166219839, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI13376842, Length=422, Percent_Identity=26.5402843601896, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI46519147, Length=372, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI37620163, Length=372, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI24233530, Length=385, Percent_Identity=26.4935064935065, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI268607595, Length=382, Percent_Identity=26.9633507853403, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI87239981, Length=393, Percent_Identity=26.2086513994911, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI62988328, Length=382, Percent_Identity=26.9633507853403, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI46519151, Length=369, Percent_Identity=28.4552845528455, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI46519154, Length=368, Percent_Identity=28.5326086956522, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI70780355, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI32967601, Length=375, Percent_Identity=27.2, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI70780357, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI215598574, Length=366, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI70780353, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI70780359, Length=406, Percent_Identity=24.6305418719212, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI52426737, Length=371, Percent_Identity=26.1455525606469, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI188595682, Length=371, Percent_Identity=26.1455525606469, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI55741641, Length=331, Percent_Identity=26.2839879154079, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI7705831, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI255982572, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI68131557, Length=403, Percent_Identity=27.0471464019851, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI52426735, Length=371, Percent_Identity=26.1455525606469, Blast_Score=67, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17542700, Length=365, Percent_Identity=27.6712328767123, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI25145251, Length=365, Percent_Identity=27.6712328767123, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71981389, Length=365, Percent_Identity=27.6712328767123, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71981414, Length=365, Percent_Identity=27.6712328767123, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71981411, Length=368, Percent_Identity=27.9891304347826, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571867, Length=371, Percent_Identity=29.6495956873315, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28571865, Length=371, Percent_Identity=29.6495956873315, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI161082089, Length=278, Percent_Identity=30.2158273381295, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082085, Length=278, Percent_Identity=30.2158273381295, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161082099, Length=278, Percent_Identity=30.2158273381295, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161082110, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI161082106, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI161082096, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24650843, Length=398, Percent_Identity=26.1306532663317, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161082081, Length=278, Percent_Identity=30.2158273381295, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581260, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581258, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21356741, Length=266, Percent_Identity=27.8195488721804, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161082092, Length=196, Percent_Identity=33.1632653061224, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281359521, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI281359519, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28558752, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28558750, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28558756, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28558754, Length=256, Percent_Identity=27.734375, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI221330482, Length=373, Percent_Identity=24.1286863270777, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI221330474, Length=373, Percent_Identity=24.1286863270777, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 53213; Mature: 53213

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSQSPQKWLEKYDVNAKDSNGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALF
HHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHEE
YALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVALGSSEEIEEYLKSKGALDSKS
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHH
FDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI
HHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHG
HHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHCC
ADVNLRAQDNGTTPIIALVEGKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQ
CCCEEEECCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCHH
DFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYPPLNDAVKYGLVNAVEALLKA
HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKWLILLCMISAFVGCGNEENEIKQNLQEKNQEVQQENVSQTKESQNQSKETFINEERS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSQSPQKWLEKYDVNAKDSNGETLLMFFAAYGSDDEVKYLLAQGADVNATDKQGQSALF
HHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHEE
YALFCGAEGCIFDKVKTLVEAGANVNAKNAQGDSVLRVALGSSEEIEEYLKSKGALDSKS
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHH
FDESVNNLSEQEISRIANPRLVEVVRTYNGKVGIKCIAELLQSDNIDEVLKEEQEVSKDI
HHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YAYEGQSALLLAAKFGYDELVATLLELGANPNVIGYYTTPLLEAATNNYYHISKLLLEHG
HHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHCC
ADVNLRAQDNGTTPIIALVEGKSKGLLSIKDEKERTKEEDKARIPLLELLIKSGGDVNAQ
CCCEEEECCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCHH
DFAREGDNINALFSALELERGNLAVLLIQSGADIKDERYPPLNDAVKYGLVNAVEALLKA
HHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GANPMQKDLFYQTSALDIIGENKLERMSSEYARTLFHSLEPEKQSRIKELINQAIETINP
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA