Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266679

Identifier: 32266679

GI number: 32266679

Start: 1145332

End: 1146438

Strand: Direct

Name: 32266679

Synonym: HH1180

Alternate gene names: NA

Gene position: 1145332-1146438 (Clockwise)

Preceding gene: 32266678

Following gene: 32266680

Centisome position: 63.66

GC content: 33.97

Gene sequence:

>1107_bases
GTGCATATATGTTGCTCAGTAGATAGTCATTATTTTCTTAGTGAGATTCAAAAAATTTATCCTGATACAACGATGATAGG
GTATTTTTACAATCCAAATATTCACCCAAAAAGCGAATATGATTTGCGGCTTCTTGATGTCAGGCGAAGTTGTAAAATGT
TAGGAGTAGAGCTTATAGAAGAAGAATATGAAAGTCAAGAATGGTTTGAAAGTGTTAGAGGACTTGAAGAAGAGCCAGAA
AAAGGAGAGCGATGTGTAAAATGTTTTGATATGCGATTAGAAAAAACTGCACAAATGGCGCATACAATGTCAATAGAATC
TTTTACCTCAACTTTACTTTCTAGCCCTCTCAAAGAGCAGCAGATTCTTTTTACTCAAGGTAACCAAATCGCGCAACATT
ATGGCTTGTGTTTTATCAAGGTTGATGTGAGGAGCAATGGAGGTACGCAAGCACAAAGTGAATTAGCAAATAAGGATAGG
CTTTATAAACAAACATATTGTGGGTGCCAATTTGCTTTAAGTAAGCAAAGAGAATCTCAAGGGCAACTTCCTCTTGAATT
GATGAGCAATATTGGGAAGCAAATTTTACCTGCGAGTAATGAGCAGCGCAAAGCTGTTTTTGATTTACGGGATAAATGTG
AGAAAGAAGGAAGGGAGTATGCGCTTTATAAACAATCAAAAATTATTTGGCGTAATTTACGAAGTATATGTATTGATGAA
GGGAAAGTAATAAGTTCGTATGTTATTACACATTCACGTAGTAAGAATATGATAAAGACTTCAAATATTACCTATATCAA
GCGCTCTGTATATGATAAAGATTATAGACTTCAATGTGTTGAGGTGGGCTATGCTAAACGTGATGAAAGTATATTTTTAA
GCATAGATGATGCAAATATTTTATTAAAAACGCAGTATGCAAATGTGCAAGAAATGGTGTATAATGCGCCTTGTTATGAA
TATGAAATAGCATTGCGCACGGCATTGTGTGGTGCAGATAGTATCAATCCTATTATTATCCTTGATAAAAAAATCAAACA
TAGTCTAAAAGTTTTTATTAATGCACATTTTCAAGAAAGTAGTATTTTTGCTATCACTCCATATTAA

Upstream 100 bases:

>100_bases
TTGGCAGCGGTTGTAGTCATAGGTATCGTTTCTTTTTGGTATTTTGCGGACAATAAAAATGAGTGAAAGCATACATATAG
AAAAAAAGAAAAATATGCTT

Downstream 100 bases:

>100_bases
AATTTTTTGGTAGAATATCACATTTGTTATAAGGAGTAAGAGAATGGATACAAATAAGATACAAGGGGATAAACCCATAA
TGAATGTGGAGAAAATTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIEEEYESQEWFESVRGLEEEPE
KGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQQILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDR
LYKQTYCGCQFALSKQRESQGQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE
GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANILLKTQYANVQEMVYNAPCYE
YEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQESSIFAITPY

Sequences:

>Translated_368_residues
MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIEEEYESQEWFESVRGLEEEPE
KGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQQILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDR
LYKQTYCGCQFALSKQRESQGQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE
GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANILLKTQYANVQEMVYNAPCYE
YEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQESSIFAITPY
>Mature_368_residues
MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIEEEYESQEWFESVRGLEEEPE
KGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQQILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDR
LYKQTYCGCQFALSKQRESQGQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE
GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANILLKTQYANVQEMVYNAPCYE
YEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQESSIFAITPY

Specific function: Unknown

COG id: COG1636

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003828 [H]

Pfam domain/function: PF02677 DUF208 [H]

EC number: NA

Molecular weight: Translated: 42633; Mature: 42633

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIE
CEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
EEYESQEWFESVRGLEEEPEKGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDRLYKQTYCGCQFALSKQRESQ
EEEEECCCHHHHHHCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE
CCCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCC
GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANI
CCEEEHHHEEECCCCCCEEECCCCEEEHHHCCCCCEEEEEEECCCCCCCEEEEEECCCEE
LLKTQYANVQEMVYNAPCYEYEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQES
EEEEECCCHHHHHHCCCCEEEHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEEEECCC
SIFAITPY
EEEEEECC
>Mature Secondary Structure
MHICCSVDSHYFLSEIQKIYPDTTMIGYFYNPNIHPKSEYDLRLLDVRRSCKMLGVELIE
CEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHH
EEYESQEWFESVRGLEEEPEKGERCVKCFDMRLEKTAQMAHTMSIESFTSTLLSSPLKEQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QILFTQGNQIAQHYGLCFIKVDVRSNGGTQAQSELANKDRLYKQTYCGCQFALSKQRESQ
EEEEECCCHHHHHHCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
GQLPLELMSNIGKQILPASNEQRKAVFDLRDKCEKEGREYALYKQSKIIWRNLRSICIDE
CCCCHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCC
GKVISSYVITHSRSKNMIKTSNITYIKRSVYDKDYRLQCVEVGYAKRDESIFLSIDDANI
CCEEEHHHEEECCCCCCEEECCCCEEEHHHCCCCCEEEEEEECCCCCCCEEEEEECCCEE
LLKTQYANVQEMVYNAPCYEYEIALRTALCGADSINPIIILDKKIKHSLKVFINAHFQES
EEEEECCCHHHHHHCCCCEEEHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEEEECCC
SIFAITPY
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]