| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is pgm
Identifier: 32266668
GI number: 32266668
Start: 1135976
End: 1137448
Strand: Direct
Name: pgm
Synonym: HH1169
Alternate gene names: 32266668
Gene position: 1135976-1137448 (Clockwise)
Preceding gene: 32266665
Following gene: 32266674
Centisome position: 63.14
GC content: 38.15
Gene sequence:
>1473_bases ATGAAAACAATTCTTGTGATTACTGATGGCATAGGATATAGTGATAAAACGCAATATAACGCCTTTTATCACGCTAAAAA GCCTACCTATGATTATTTATTCAAAAATGTGCCCTATGGTATGATTGATACTTTTGGTTTGAGCGTGGGATTACCTCAAG GACAAATGGGAAATTCTGAAGTAGGGCATATGTGCATTGGTTCCGGGCGAGTATTATATCAAGATTTGGTTAGAATCTCG CGTGCGATTGAGTATGATGAGATAAAAGATAATCCTGCTTTGGTTGAGGTTACGCAGCAGAGTGCAGTTGTGCATTTGTG TGGATTACTAAGTGATGGCGGGGTGCATTCTCATATTGTGCATTTAAAGGCGCTTGCACAGATTCTAAGTACTCAAGGTA AAAGGGTGTATTTACATCTTATTACTGATGGACGCGATGTTTTGCCTAAAAGTGCGCTTAATTATCTTGCAGATATAGAG TCTATTTGCGAAGATAATGTAAGTATAGCAAGTGTATCTGGGCGTTTTTATGCGATGGATAGAGATAAAAGATGGGATAG AGTGCAAAAGGCATATGAAAGTATAGCACTTGGCAAAAATCCTACAAATCTTTCTCCTAAAGAGTATATTCAATCTCAAT ATGATGAAGGAATTTTTGATGAATTTCTTACTCCTGTGAGTTTTGGAGGGTTTCAAGGGATGAATGATGATGAAAGCTTT GTGTTTGTGAATTTTCGATCTGATAGGGCACGTGAAATTGTTGATTGCTTAGGGAATCCACAATTTAAAGAGTTTAAGCG GGAGCGATATGTAAAGCTTCATATTGCTACAATGACAGAATATGACGCAACATTCCCCTACCCTATTCTTTTTCCCAAGC AAAATGTGCAAAATACTCTCGCCGAAGTAATTTCTTCACATCGTTTAAAGCAGTTTCATACCGCTGAAACTGAAAAATAT GCTCACGTTACATTTTTCCTTAATGGAGGGCGCGAGGAAGCTTTTATAGGAGAGGAACGAGTGCTTATCCCTTCCCCTAA TGTCAAAACTTATGATTTACAGCCTCAAATGAATGCTTCTGCAGTGGGTGATGCAGTAATAAAAGCTGTAGAGCAAGGAT ATGATTTTGTGGTGGTAAATTTTGCAAATGGTGATATGGTCGGGCATACAGGGAATCTTGAAGCAGCAATTAAAGCAGTA GAAGCGGTGGATAAGGAATTAGGTAGGATTGTAGAATCTGCTCAAAAACACCATTATGCTCTTTTTATCACGAGTGATCA CGGAAATTGCGAAGAAATGAAAGATGAAAAAGGTAATATGCTCACAAATCATACCGTTGGACAAGTATGGTGTTTTGGTA TGATTGAGGGAGTGAGTAAAATTGAGAATGGAGGATTGAATAACATCGCTCCAAGTGTCCTTAAGGCAATGAATCTGCCT ATTCCACCTGAAATGGATAAGCCATTATTTTAA
Upstream 100 bases:
>100_bases CCTTTTCCCCTTAACTTTTAAGGGAGTTAATTAGTTAATGAAAGGTTTTGGATTTTAGCTACAATTAGTTAATATGAAAG ATTAAAATGAGGAGCATATT
Downstream 100 bases:
>100_bases AAAAATTGGTTGCAATAAGTATAAAGCTTAGCTTTTATATTAAATGCTTAAATACACCGCAAGTGTGGTGATAATAAATC CTGCACCTAAAACGCCAAAG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKTILVITDGIGYSDKTQYNAFYHAKKPTYDYLFKNVPYGMIDTFGLSVGLPQGQMGNSEVGHMCIGSGRVLYQDLVRIS RAIEYDEIKDNPALVEVTQQSAVVHLCGLLSDGGVHSHIVHLKALAQILSTQGKRVYLHLITDGRDVLPKSALNYLADIE SICEDNVSIASVSGRFYAMDRDKRWDRVQKAYESIALGKNPTNLSPKEYIQSQYDEGIFDEFLTPVSFGGFQGMNDDESF VFVNFRSDRAREIVDCLGNPQFKEFKRERYVKLHIATMTEYDATFPYPILFPKQNVQNTLAEVISSHRLKQFHTAETEKY AHVTFFLNGGREEAFIGEERVLIPSPNVKTYDLQPQMNASAVGDAVIKAVEQGYDFVVVNFANGDMVGHTGNLEAAIKAV EAVDKELGRIVESAQKHHYALFITSDHGNCEEMKDEKGNMLTNHTVGQVWCFGMIEGVSKIENGGLNNIAPSVLKAMNLP IPPEMDKPLF
Sequences:
>Translated_490_residues MKTILVITDGIGYSDKTQYNAFYHAKKPTYDYLFKNVPYGMIDTFGLSVGLPQGQMGNSEVGHMCIGSGRVLYQDLVRIS RAIEYDEIKDNPALVEVTQQSAVVHLCGLLSDGGVHSHIVHLKALAQILSTQGKRVYLHLITDGRDVLPKSALNYLADIE SICEDNVSIASVSGRFYAMDRDKRWDRVQKAYESIALGKNPTNLSPKEYIQSQYDEGIFDEFLTPVSFGGFQGMNDDESF VFVNFRSDRAREIVDCLGNPQFKEFKRERYVKLHIATMTEYDATFPYPILFPKQNVQNTLAEVISSHRLKQFHTAETEKY AHVTFFLNGGREEAFIGEERVLIPSPNVKTYDLQPQMNASAVGDAVIKAVEQGYDFVVVNFANGDMVGHTGNLEAAIKAV EAVDKELGRIVESAQKHHYALFITSDHGNCEEMKDEKGNMLTNHTVGQVWCFGMIEGVSKIENGGLNNIAPSVLKAMNLP IPPEMDKPLF >Mature_490_residues MKTILVITDGIGYSDKTQYNAFYHAKKPTYDYLFKNVPYGMIDTFGLSVGLPQGQMGNSEVGHMCIGSGRVLYQDLVRIS RAIEYDEIKDNPALVEVTQQSAVVHLCGLLSDGGVHSHIVHLKALAQILSTQGKRVYLHLITDGRDVLPKSALNYLADIE SICEDNVSIASVSGRFYAMDRDKRWDRVQKAYESIALGKNPTNLSPKEYIQSQYDEGIFDEFLTPVSFGGFQGMNDDESF VFVNFRSDRAREIVDCLGNPQFKEFKRERYVKLHIATMTEYDATFPYPILFPKQNVQNTLAEVISSHRLKQFHTAETEKY AHVTFFLNGGREEAFIGEERVLIPSPNVKTYDLQPQMNASAVGDAVIKAVEQGYDFVVVNFANGDMVGHTGNLEAAIKAV EAVDKELGRIVESAQKHHYALFITSDHGNCEEMKDEKGNMLTNHTVGQVWCFGMIEGVSKIENGGLNNIAPSVLKAMNLP IPPEMDKPLF
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family
Homologues:
Organism=Escherichia coli, GI1790041, Length=506, Percent_Identity=42.6877470355731, Blast_Score=387, Evalue=1e-109, Organism=Caenorhabditis elegans, GI32564249, Length=502, Percent_Identity=43.2270916334661, Blast_Score=398, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17507741, Length=502, Percent_Identity=43.2270916334661, Blast_Score=398, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMI_HELHP (Q7VGZ8)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860700.1 - ProteinModelPortal: Q7VGZ8 - SMR: Q7VGZ8 - GeneID: 1492857 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1169 - NMPDR: fig|235279.1.peg.1169 - HOGENOM: HBG613255 - OMA: DHGNAEL - ProtClustDB: PRK05434 - BioCyc: HHEP235279:HH_1169-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_01038 - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 - Gene3D: G3DSA:3.40.720.10 - Gene3D: G3DSA:3.40.1450.10 - PIRSF: PIRSF001492 - TIGRFAMs: TIGR01307
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N
EC number: =5.4.2.1
Molecular weight: Translated: 54777; Mature: 54777
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: ACT_SITE 59-59
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILVITDGIGYSDKTQYNAFYHAKKPTYDYLFKNVPYGMIDTFGLSVGLPQGQMGNSE CCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCHHHHCCCEECCCCCCCCCCC VGHMCIGSGRVLYQDLVRISRAIEYDEIKDNPALVEVTQQSAVVHLCGLLSDGGVHSHIV CCCEEECCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHH HLKALAQILSTQGKRVYLHLITDGRDVLPKSALNYLADIESICEDNVSIASVSGRFYAMD HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEC RDKRWDRVQKAYESIALGKNPTNLSPKEYIQSQYDEGIFDEFLTPVSFGGFQGMNDDESF CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCE VFVNFRSDRAREIVDCLGNPQFKEFKRERYVKLHIATMTEYDATFPYPILFPKQNVQNTL EEEEECCHHHHHHHHHHCCCCHHHHHHCCEEEEEEEEEECCCCCCCCEEECCCHHHHHHH AEVISSHRLKQFHTAETEKYAHVTFFLNGGREEAFIGEERVLIPSPNVKTYDLQPQMNAS HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCEEEECCCCCEEEECCCCCCHH AVGDAVIKAVEQGYDFVVVNFANGDMVGHTGNLEAAIKAVEAVDKELGRIVESAQKHHYA HHHHHHHHHHHCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE LFITSDHGNCEEMKDEKGNMLTNHTVGQVWCFGMIEGVSKIENGGLNNIAPSVLKAMNLP EEEECCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC IPPEMDKPLF CCCCCCCCCC >Mature Secondary Structure MKTILVITDGIGYSDKTQYNAFYHAKKPTYDYLFKNVPYGMIDTFGLSVGLPQGQMGNSE CCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCHHHHCCCEECCCCCCCCCCC VGHMCIGSGRVLYQDLVRISRAIEYDEIKDNPALVEVTQQSAVVHLCGLLSDGGVHSHIV CCCEEECCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHH HLKALAQILSTQGKRVYLHLITDGRDVLPKSALNYLADIESICEDNVSIASVSGRFYAMD HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEC RDKRWDRVQKAYESIALGKNPTNLSPKEYIQSQYDEGIFDEFLTPVSFGGFQGMNDDESF CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCE VFVNFRSDRAREIVDCLGNPQFKEFKRERYVKLHIATMTEYDATFPYPILFPKQNVQNTL EEEEECCHHHHHHHHHHCCCCHHHHHHCCEEEEEEEEEECCCCCCCCEEECCCHHHHHHH AEVISSHRLKQFHTAETEKYAHVTFFLNGGREEAFIGEERVLIPSPNVKTYDLQPQMNAS HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCEEEECCCCCEEEECCCCCCHH AVGDAVIKAVEQGYDFVVVNFANGDMVGHTGNLEAAIKAVEAVDKELGRIVESAQKHHYA HHHHHHHHHHHCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE LFITSDHGNCEEMKDEKGNMLTNHTVGQVWCFGMIEGVSKIENGGLNNIAPSVLKAMNLP EEEECCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC IPPEMDKPLF CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12810954