Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266605

Identifier: 32266605

GI number: 32266605

Start: 1077025

End: 1078869

Strand: Direct

Name: 32266605

Synonym: HH1106

Alternate gene names: NA

Gene position: 1077025-1078869 (Clockwise)

Preceding gene: 32266604

Following gene: 32266606

Centisome position: 59.86

GC content: 36.04

Gene sequence:

>1845_bases
GTGCAAGAAACAATAATGGAACAAATAAGTGAAAATCTGCTAGAAAACTTTATTAACGAATATATCAGCGCAAAAAATCA
GCTTTTGCAAGGAGGGAATCCTCTCTATGCTCTCATTGATAAAGCCCATTATGCGCTCAGTCAAATTGCCCCGCTAGATT
CTCGTGCTACGCATACATTACAATCTCTCACTCAAAGCATTCAAGAACCAATGAAAGTGGCTATTATCGGGCAATTTAGT
AGCGGAAAATCCACGTTTTTAAATGCACTTTTGGGCAAAAATATCCTGCCTAGTGGTATCACTCCCATAACTGCAAAAAT
ATGCCATATTGTCTATGGACAAGATTATGCACTTGAGATTCACTACAAAAATGGCAATACTGCCACAAAAACACTCTCAT
ACCTCAACGAAGTAAGTGAAGTCCAAAATGCCAAAATCGCCTTTTACAAGCTTTATGCGCCATTAGAACTCCTTAAAAAA
ATAAGTTTTCTTGATACACCCGGCTTTAACTCGCAAAATCAAAGCGATACAGATACTACAAATTCTATATTAGAAAGCGT
TGATGGCATCATTTGGCTCACCCTCATTGATAATGTTGGCAAACACAGCGAAAAAGAAATTATCCTCTCCCACATTAAAC
GTTACGCAAGCAAAAGCCTCTGTGTCCTCAATCAAAAAGATAGGCTTAAAAATCAAGAGGAAATCAACATAAGCCTTGAA
TATGCTAAGAAAGCATTCAATGGACTTTTTGAGGAAATTATTGCCATATCTGCTAAAAATGCACTGCTTTCTTATGATGC
TCCAAAAGAGCAAAGTGAGCATATGAGAGCAGATTCTCACATAGATTTTGTGCTTGATTTTCTCCATACACACATTGCTC
CATTAGCTCAAGAATCTAAAAAACGCACGATTATTACGCAACTGCGCACTCTCGTACTTAGATATGCTCGTTTAAGTTTT
CACGCGCATTTACGCTTTACTAAGTGTGAGACACTCCTTGCAGATTCTACTAAGTACTTCACAGAGCAATACCCTCAAAG
TGCATTTTACAAATCATTCCCTACACTTTTTCATACTTTAGAATCCCAACTTGAATCACTTACTCAACACATTTACAACG
CACTTGAAAAAACTCCCAAAGAGTTTGTGCGTGCTGATAAAAAATTTGGTATAAAAACACAAAATATACAAATAAAAGAC
ATCACAACACTTCCTAGAGAGCGATTAAATCTTAGTTTATGCAATACAGATTCTACATTTGCAAGGCAATTTACCAAACT
TGGTTTTGATATAACTGCCATAGGAGAACAATTTAATGCTCTGCTAAACGCACATATAGGGCATTTGAATGACAATATCA
TACAATGGTATGAAACATTTATTCCTACTTTGCAAAACTCACTTTTGCAAAAAACACTTAATGAGATAATGGGAACATAT
GATAACCTTATGCGTGAGCATTGTGAGAATCTTAACGCCCAATTAATGCTCGTTGCAAAAATCTTAACACTCAATTACCC
ACTAGCAATAAATCTTTGCCTCAATACAATAAGTTTAAAAATCCAAGAAGCCTTAGAAAAATACACCAAAACACCAGATA
CTTTGCCACTTTTTAATCCCACGCTTGAAAATATCCGCGATGAGCTCAATCTTGGCTTTCACTTCAACCTTTTACAAGAA
AATCTTTTAACGCAACCACTGCATAAAAAAGCGTTGTGGCATTTTGAGCGAGAGGAAAAAGCACTTTGTGAGAAGCAATC
TGCAATTATTGCAACTTATAAAGAGCAATACGCTCATCATTTTAAACAGCTTAAATCTTTGCTTCAAGCACTTAAAGATG
TTTAA

Upstream 100 bases:

>100_bases
AGCACTTAAAGATGCTCTTTACACCAAGCGAGAACAGCTTACAGGTATTATAAATGAACTTATGCAAGGTTTGCATAGTT
TGCAATAATGAGATGAAAGG

Downstream 100 bases:

>100_bases
GATTAAATGAAAAAGATAATTTTTACTTTTCTCTGCACTCTCTCATTGTGCTGTTGTGATAGCCCACAACAAGCCTTCGA
GCTTTTGCTCAATTATTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTLQSLTQSIQEPMKVAIIGQFS
SGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEIHYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKK
ISFLDTPGFNSQNQSDTDTTNSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE
YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESKKRTIITQLRTLVLRYARLSF
HAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTLESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKD
ITTLPRERLNLSLCNTDSTFARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY
DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNPTLENIRDELNLGFHFNLLQE
NLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHHFKQLKSLLQALKDV

Sequences:

>Translated_614_residues
MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTLQSLTQSIQEPMKVAIIGQFS
SGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEIHYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKK
ISFLDTPGFNSQNQSDTDTTNSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE
YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESKKRTIITQLRTLVLRYARLSF
HAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTLESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKD
ITTLPRERLNLSLCNTDSTFARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY
DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNPTLENIRDELNLGFHFNLLQE
NLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHHFKQLKSLLQALKDV
>Mature_614_residues
MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTLQSLTQSIQEPMKVAIIGQFS
SGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEIHYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKK
ISFLDTPGFNSQNQSDTDTTNSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE
YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESKKRTIITQLRTLVLRYARLSF
HAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTLESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKD
ITTLPRERLNLSLCNTDSTFARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY
DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNPTLENIRDELNLGFHFNLLQE
NLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHHFKQLKSLLQALKDV

Specific function: Unknown

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG148 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 70215; Mature: 70215

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
QSLTQSIQEPMKVAIIGQFSSGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEI
HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
HYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKKISFLDTPGFNSQNQSDTDTT
EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
NSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE
HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCCCHHEEEHHH
YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESK
HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KRTIITQLRTLVLRYARLSFHAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTL
HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH
ESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKDITTLPRERLNLSLCNTDSTF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCEEEEECHHCCHHHCCEEEECCCHHH
ARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNP
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TLENIRDELNLGFHFNLLQENLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHH
HHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKQLKSLLQALKDV
HHHHHHHHHHHHCC
>Mature Secondary Structure
MQETIMEQISENLLENFINEYISAKNQLLQGGNPLYALIDKAHYALSQIAPLDSRATHTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
QSLTQSIQEPMKVAIIGQFSSGKSTFLNALLGKNILPSGITPITAKICHIVYGQDYALEI
HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
HYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKKISFLDTPGFNSQNQSDTDTT
EECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
NSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQKDRLKNQEEINISLE
HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCCCHHEEEHHH
YAKKAFNGLFEEIIAISAKNALLSYDAPKEQSEHMRADSHIDFVLDFLHTHIAPLAQESK
HHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KRTIITQLRTLVLRYARLSFHAHLRFTKCETLLADSTKYFTEQYPQSAFYKSFPTLFHTL
HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH
ESQLESLTQHIYNALEKTPKEFVRADKKFGIKTQNIQIKDITTLPRERLNLSLCNTDSTF
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEECCEEEEECHHCCHHHCCEEEECCCHHH
ARQFTKLGFDITAIGEQFNALLNAHIGHLNDNIIQWYETFIPTLQNSLLQKTLNEIMGTY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNLMREHCENLNAQLMLVAKILTLNYPLAINLCLNTISLKIQEALEKYTKTPDTLPLFNP
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TLENIRDELNLGFHFNLLQENLLTQPLHKKALWHFEREEKALCEKQSAIIATYKEQYAHH
HHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKQLKSLLQALKDV
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]