Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266283

Identifier: 32266283

GI number: 32266283

Start: 760482

End: 761747

Strand: Direct

Name: 32266283

Synonym: HH0784

Alternate gene names: NA

Gene position: 760482-761747 (Clockwise)

Preceding gene: 32266282

Following gene: 32266284

Centisome position: 42.27

GC content: 36.65

Gene sequence:

>1266_bases
ATGGGCACAAAAACATTATGGAATTACTTGAAATTGACAGGATTATGCGTTCTTTTGAGTGCTTTTCTTAGCGGTTGTCT
CTCTTCTTTTGGTGCAAAACTCCAAGAAGATGCTTCACTCCCACAAATTGATTCTATAAATACACTCGCTGATGTTTCGT
CTGTAGGCTTTGAATGGAAATTTCTTGATAATGAACACATAAAAGGATTTGTCATTTATCGTGCTCAAGCAAAAGATAAT
CAAAAACTACAAAAAATCGCTACGATTCCAAACCGCTTTGCTACACATTTTTATGATATAAATCTCAATCCCCAAACAAA
ATATATTTATGCCTTTGCTACGCTTGGCACTGATAATACGATTTCTCCAAAAAGCAAACCTATTCTTGTGCAAACATCTT
TTATTGACGCGGTAGAGAGTGTCTTCGCTCTGAATAATCAACCACGCACCATTAAGCTTATTTGGTCGCCACACCCAAAT
CCAAGCATAGATTCTTATTTGGTTGAACGCCTAAATAAAGCAGGTGAATTTAAAACAATCAAAACAATTCCTCATCGCTT
AAGTGTAGAGTATTTTGATGATGATTTAAAAGATGGAGAAAGCTACACTTATCGTATTATCGCTCAAAGCTATGAGGGTA
TCAAAAGTAAGCCTTCACAAAGCGTGAGTGTAAAAACAATCCCTCAACCTGCACCTATTGAAAATATCCAAGCTACTATA
GAGTTGCCACGAGCCATTAAAATTACTTGGAAAGAAGCCCCTGATACACAAGGTGTGAGCAAAAAACAATATAAGATTCT
CTATTCTCCCAATGATAAAAACTACAAAAAACTAGCAACTACCAACCAAACAAATTATACACATAAACTCCAAGACAAAG
AAGATGGCATAAGTTATTACTACCAAGTTGTGCTTTTAGGCGATAATGGCTTGGAAGGACGTATAAGTAGCACACCTGCT
AAAGGTTCAAGTCTTCCACCTCCAAGCAAGCCTTTGCACTTTGAAGGAAAAATCCTTAATGGTAAAGCCACTCTCTCGTG
GGAAACACCAAGTGATGAGCGTATTCAAAATTATATCGTTTATCGCAAAGAAGGGAAAGTATGGGCACAAAGTGCGCGCT
TTATTGATATATACGATACTACCTTTACCGACAAAGAAATGCAAAAAGGTATCAGTTATAAATATAGCGTAACAAGTATT
GACAAAAATGGTATAGAATCTGCGCCCACACAAGAAATAGAACTCTCCATAGAGGCTCAAAAATAA

Upstream 100 bases:

>100_bases
TTTATACACCCCAAAACGCAACAAAACTGCACTTTTAAAGCACCTATTTTACCAGATATGCTAAAATTCCTCCAAACTCA
CTTCACAAAGGATATACCCG

Downstream 100 bases:

>100_bases
TGCCTCATTTTCTTGCATCTCATATTACATTACCACCTATGCCTTTTACACAAGAAGGCTATACCTTTGTATATGAAGCC
AAACAATGCAACGATTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Fibronectin Type III; Diaminopimelate Decarboxylase Dap Decarboxylase; Fibronectin Domain Containing Protein

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MGTKTLWNYLKLTGLCVLLSAFLSGCLSSFGAKLQEDASLPQIDSINTLADVSSVGFEWKFLDNEHIKGFVIYRAQAKDN
QKLQKIATIPNRFATHFYDINLNPQTKYIYAFATLGTDNTISPKSKPILVQTSFIDAVESVFALNNQPRTIKLIWSPHPN
PSIDSYLVERLNKAGEFKTIKTIPHRLSVEYFDDDLKDGESYTYRIIAQSYEGIKSKPSQSVSVKTIPQPAPIENIQATI
ELPRAIKITWKEAPDTQGVSKKQYKILYSPNDKNYKKLATTNQTNYTHKLQDKEDGISYYYQVVLLGDNGLEGRISSTPA
KGSSLPPPSKPLHFEGKILNGKATLSWETPSDERIQNYIVYRKEGKVWAQSARFIDIYDTTFTDKEMQKGISYKYSVTSI
DKNGIESAPTQEIELSIEAQK

Sequences:

>Translated_421_residues
MGTKTLWNYLKLTGLCVLLSAFLSGCLSSFGAKLQEDASLPQIDSINTLADVSSVGFEWKFLDNEHIKGFVIYRAQAKDN
QKLQKIATIPNRFATHFYDINLNPQTKYIYAFATLGTDNTISPKSKPILVQTSFIDAVESVFALNNQPRTIKLIWSPHPN
PSIDSYLVERLNKAGEFKTIKTIPHRLSVEYFDDDLKDGESYTYRIIAQSYEGIKSKPSQSVSVKTIPQPAPIENIQATI
ELPRAIKITWKEAPDTQGVSKKQYKILYSPNDKNYKKLATTNQTNYTHKLQDKEDGISYYYQVVLLGDNGLEGRISSTPA
KGSSLPPPSKPLHFEGKILNGKATLSWETPSDERIQNYIVYRKEGKVWAQSARFIDIYDTTFTDKEMQKGISYKYSVTSI
DKNGIESAPTQEIELSIEAQK
>Mature_420_residues
GTKTLWNYLKLTGLCVLLSAFLSGCLSSFGAKLQEDASLPQIDSINTLADVSSVGFEWKFLDNEHIKGFVIYRAQAKDNQ
KLQKIATIPNRFATHFYDINLNPQTKYIYAFATLGTDNTISPKSKPILVQTSFIDAVESVFALNNQPRTIKLIWSPHPNP
SIDSYLVERLNKAGEFKTIKTIPHRLSVEYFDDDLKDGESYTYRIIAQSYEGIKSKPSQSVSVKTIPQPAPIENIQATIE
LPRAIKITWKEAPDTQGVSKKQYKILYSPNDKNYKKLATTNQTNYTHKLQDKEDGISYYYQVVLLGDNGLEGRISSTPAK
GSSLPPPSKPLHFEGKILNGKATLSWETPSDERIQNYIVYRKEGKVWAQSARFIDIYDTTFTDKEMQKGISYKYSVTSID
KNGIESAPTQEIELSIEAQK

Specific function: Unknown

COG id: COG3401

COG function: function code R; Fibronectin type 3 domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47483; Mature: 47352

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3 L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKTLWNYLKLTGLCVLLSAFLSGCLSSFGAKLQEDASLPQIDSINTLADVSSVGFEWK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHCCEEEE
FLDNEHIKGFVIYRAQAKDNQKLQKIATIPNRFATHFYDINLNPQTKYIYAFATLGTDNT
EECCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECCCCC
ISPKSKPILVQTSFIDAVESVFALNNQPRTIKLIWSPHPNPSIDSYLVERLNKAGEFKTI
CCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEE
KTIPHRLSVEYFDDDLKDGESYTYRIIAQSYEGIKSKPSQSVSVKTIPQPAPIENIQATI
ECCCCCEEEEECCCCCCCCCCEEEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCCEEEE
ELPRAIKITWKEAPDTQGVSKKQYKILYSPNDKNYKKLATTNQTNYTHKLQDKEDGISYY
ECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEECCCCCCCCEEE
YQVVLLGDNGLEGRISSTPAKGSSLPPPSKPLHFEGKILNGKATLSWETPSDERIQNYIV
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCEEEEEECCCCHHHHEEEEE
YRKEGKVWAQSARFIDIYDTTFTDKEMQKGISYKYSVTSIDKNGIESAPTQEIELSIEAQ
EEECCCEEECCCEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEC
K
C
>Mature Secondary Structure 
GTKTLWNYLKLTGLCVLLSAFLSGCLSSFGAKLQEDASLPQIDSINTLADVSSVGFEWK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHCCEEEE
FLDNEHIKGFVIYRAQAKDNQKLQKIATIPNRFATHFYDINLNPQTKYIYAFATLGTDNT
EECCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECCCCC
ISPKSKPILVQTSFIDAVESVFALNNQPRTIKLIWSPHPNPSIDSYLVERLNKAGEFKTI
CCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEE
KTIPHRLSVEYFDDDLKDGESYTYRIIAQSYEGIKSKPSQSVSVKTIPQPAPIENIQATI
ECCCCCEEEEECCCCCCCCCCEEEEEEEEHHCCCCCCCCCCEEEEECCCCCCCCCCEEEE
ELPRAIKITWKEAPDTQGVSKKQYKILYSPNDKNYKKLATTNQTNYTHKLQDKEDGISYY
ECCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEECCCCCCCCEEE
YQVVLLGDNGLEGRISSTPAKGSSLPPPSKPLHFEGKILNGKATLSWETPSDERIQNYIV
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCEEEEEECCCCHHHHEEEEE
YRKEGKVWAQSARFIDIYDTTFTDKEMQKGISYKYSVTSIDKNGIESAPTQEIELSIEAQ
EEECCCEEECCCEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA