| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is trmB
Identifier: 32266284
GI number: 32266284
Start: 761747
End: 762937
Strand: Direct
Name: trmB
Synonym: HH0785
Alternate gene names: 32266284
Gene position: 761747-762937 (Clockwise)
Preceding gene: 32266283
Following gene: 32266285
Centisome position: 42.34
GC content: 34.17
Gene sequence:
>1191_bases ATGCCTCATTTTCTTGCATCTCATATTACATTACCACCTATGCCTTTTACACAAGAAGGCTATACCTTTGTATATGAAGC CAAACAATGCAACGATTCTTCACAATCACTTATTTTGGTGCGATATGAAGATAATGAGTTTTTTTTACGCAAAGCGTGGC GAGGCAATAAAAATAATGCTATTCTCAAATGTGAAAAAAGCACAAAAACTCAACCTACAGGCATTATTAAGAATGCCCTT AAGATTCTATGTGCGTATCAAAAAAATGTTATCTCTCATAACCTCAACAAAAATACGCCACGACAAAATCTCCAATCTCC CTATTTTCAGTCTATGGATTTTTTTTTGGATTTTGCAAAGCCTTGCCTTATTGAAATAGGCTTTGGCTCTGGGCGCCACC TTTTGCATCTTGCACAGAGCAACCCTCATTTTATGTGTATTGGTATAGAAATTCATACTCCCTCTATTGAGCAGATTCTT AGGCAAGTGCAACTCTTGGGTTTAGAGAATCTTTATATCATTAATGGCGATGCGCGTATCCTCCTTGAAATTCTCTCCTC TCATATTGCACAAGGTATTTATGTGCATTTTCCTGTGCCGTGGAATAAAAAACACCATAGGCGCATTTTTTCGCCCAAAT TTTTTCAGGAATCTTTGCGCGTTTTAGATAATAATGGAGTGCTTCATTTGCGCAGTGATGATGAAATTTATTTCCAAGAT GCCCTTTCCCTTGCCTTGCAACAAGAAAGCATAAGCCTTGAAATACACAAGAATCAACAAGAAGTAATTACAAGCAAATA CGAAGCAAGATGGAAAAAACAACAAAAAAACATTTATGATTTAAAGATTTTTCATACTTATAAAAACACAAATAATGAAA AAAATGTAAAAAATACCCAAAAAAACTTTTATTTTGATAAAATTCTAAGAAAAAATTTGGATAATTACAAAAATTTTCCA CATAAGAAAATTGCTAATGATTGGTTTTTGCATATTGATAATCTGTATTGTGCGGGGGATATATATGTATTGGCATTATG TTTTGGGGATTTTAACCAGCCTCAAAGCAAGTTTTTGCAAATTGAATTCTGCAATAATGTATCAGCTCGGTATATTGGTA GTAACCCTATCCCTACACAAGCAGCCATCAAGGCGCATAAATATTTAATACAGATTCTAACACAGGAGTAA
Upstream 100 bases:
>100_bases AAGGTATCAGTTATAAATATAGCGTAACAAGTATTGACAAAAATGGTATAGAATCTGCGCCCACACAAGAAATAGAACTC TCCATAGAGGCTCAAAAATA
Downstream 100 bases:
>100_bases AATTTGAGCACGATTATAGAAGCAAAAAATCTCAATCTAGGCTATAATGATGATCTTGTCATTAAAGATGCCACTTTTAA TATTAACGCTAAAGAGTTTG
Product: tRNA (guanine-N(7)-)-methyltransferase
Products: NA
Alternate protein names: tRNA(m7G46)-methyltransferase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MPHFLASHITLPPMPFTQEGYTFVYEAKQCNDSSQSLILVRYEDNEFFLRKAWRGNKNNAILKCEKSTKTQPTGIIKNAL KILCAYQKNVISHNLNKNTPRQNLQSPYFQSMDFFLDFAKPCLIEIGFGSGRHLLHLAQSNPHFMCIGIEIHTPSIEQIL RQVQLLGLENLYIINGDARILLEILSSHIAQGIYVHFPVPWNKKHHRRIFSPKFFQESLRVLDNNGVLHLRSDDEIYFQD ALSLALQQESISLEIHKNQQEVITSKYEARWKKQQKNIYDLKIFHTYKNTNNEKNVKNTQKNFYFDKILRKNLDNYKNFP HKKIANDWFLHIDNLYCAGDIYVLALCFGDFNQPQSKFLQIEFCNNVSARYIGSNPIPTQAAIKAHKYLIQILTQE
Sequences:
>Translated_396_residues MPHFLASHITLPPMPFTQEGYTFVYEAKQCNDSSQSLILVRYEDNEFFLRKAWRGNKNNAILKCEKSTKTQPTGIIKNAL KILCAYQKNVISHNLNKNTPRQNLQSPYFQSMDFFLDFAKPCLIEIGFGSGRHLLHLAQSNPHFMCIGIEIHTPSIEQIL RQVQLLGLENLYIINGDARILLEILSSHIAQGIYVHFPVPWNKKHHRRIFSPKFFQESLRVLDNNGVLHLRSDDEIYFQD ALSLALQQESISLEIHKNQQEVITSKYEARWKKQQKNIYDLKIFHTYKNTNNEKNVKNTQKNFYFDKILRKNLDNYKNFP HKKIANDWFLHIDNLYCAGDIYVLALCFGDFNQPQSKFLQIEFCNNVSARYIGSNPIPTQAAIKAHKYLIQILTQE >Mature_395_residues PHFLASHITLPPMPFTQEGYTFVYEAKQCNDSSQSLILVRYEDNEFFLRKAWRGNKNNAILKCEKSTKTQPTGIIKNALK ILCAYQKNVISHNLNKNTPRQNLQSPYFQSMDFFLDFAKPCLIEIGFGSGRHLLHLAQSNPHFMCIGIEIHTPSIEQILR QVQLLGLENLYIINGDARILLEILSSHIAQGIYVHFPVPWNKKHHRRIFSPKFFQESLRVLDNNGVLHLRSDDEIYFQDA LSLALQQESISLEIHKNQQEVITSKYEARWKKQQKNIYDLKIFHTYKNTNNEKNVKNTQKNFYFDKILRKNLDNYKNFPH KKIANDWFLHIDNLYCAGDIYVLALCFGDFNQPQSKFLQIEFCNNVSARYIGSNPIPTQAAIKAHKYLIQILTQE
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
COG id: COG0220
COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmB family
Homologues:
Organism=Escherichia coli, GI1789330, Length=185, Percent_Identity=28.6486486486486, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TRMB_HELHP (Q7VI24)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860316.1 - ProteinModelPortal: Q7VI24 - SMR: Q7VI24 - GeneID: 1492474 - GenomeReviews: AE017125_GR - KEGG: hhe:HH0785 - NMPDR: fig|235279.1.peg.785 - HOGENOM: HBG321449 - ProtClustDB: PRK14121 - BioCyc: HHEP235279:HH_0785-MONOMER - BRENDA: 2.1.1.33 - HAMAP: MF_01057 - InterPro: IPR003358 - PANTHER: PTHR23417:SF1 - TIGRFAMs: TIGR00091
Pfam domain/function: PF02390 Methyltransf_4
EC number: =2.1.1.33
Molecular weight: Translated: 46254; Mature: 46122
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: BINDING 125-125 BINDING 150-150 BINDING 177-177 BINDING 233-233
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFLASHITLPPMPFTQEGYTFVYEAKQCNDSSQSLILVRYEDNEFFLRKAWRGNKNNA CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEHHCCCCCCCE ILKCEKSTKTQPTGIIKNALKILCAYQKNVISHNLNKNTPRQNLQSPYFQSMDFFLDFAK EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCC PCLIEIGFGSGRHLLHLAQSNPHFMCIGIEIHTPSIEQILRQVQLLGLENLYIINGDARI CEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHH LLEILSSHIAQGIYVHFPVPWNKKHHRRIFSPKFFQESLRVLDNNGVLHLRSDDEIYFQD HHHHHHHHHCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHH ALSLALQQESISLEIHKNQQEVITSKYEARWKKQQKNIYDLKIFHTYKNTNNEKNVKNTQ HHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHH KNFYFDKILRKNLDNYKNFPHKKIANDWFLHIDNLYCAGDIYVLALCFGDFNQPQSKFLQ HHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCEEECCHHEEEEEECCCCCCCHHHEEE IEFCNNVSARYIGSNPIPTQAAIKAHKYLIQILTQE EEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHFLASHITLPPMPFTQEGYTFVYEAKQCNDSSQSLILVRYEDNEFFLRKAWRGNKNNA CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEHHCCCCCCCE ILKCEKSTKTQPTGIIKNALKILCAYQKNVISHNLNKNTPRQNLQSPYFQSMDFFLDFAK EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHCCC PCLIEIGFGSGRHLLHLAQSNPHFMCIGIEIHTPSIEQILRQVQLLGLENLYIINGDARI CEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHH LLEILSSHIAQGIYVHFPVPWNKKHHRRIFSPKFFQESLRVLDNNGVLHLRSDDEIYFQD HHHHHHHHHCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHH ALSLALQQESISLEIHKNQQEVITSKYEARWKKQQKNIYDLKIFHTYKNTNNEKNVKNTQ HHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHH KNFYFDKILRKNLDNYKNFPHKKIANDWFLHIDNLYCAGDIYVLALCFGDFNQPQSKFLQ HHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCEEECCHHEEEEEECCCCCCCHHHEEE IEFCNNVSARYIGSNPIPTQAAIKAHKYLIQILTQE EEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12810954