| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is aroC
Identifier: 32266199
GI number: 32266199
Start: 679580
End: 680656
Strand: Direct
Name: aroC
Synonym: HH0700
Alternate gene names: 32266199
Gene position: 679580-680656 (Clockwise)
Preceding gene: 32266198
Following gene: 32266200
Centisome position: 37.77
GC content: 40.67
Gene sequence:
>1077_bases ATGAATACTTTTGGCAAATCATTTCGTGTAAGCACTTTTGGAGAATCTCACGGCGAGGGGATTGGTTGTGTGATTGATGG CATTCCTGCAGGATTGCATATAGATGAACTTTTTATAGAATCTATGATGACAAGGCGCGCACCCGGACGCAATCAATATA CAACACAACGTAAAGAATCTGATAAAGTGCAAATTCTAAGTGGTGTGTTTGAAGGGTTGAGCACGGGCACACCTATTGGT ATGTGGATAGCAAATACTGGAACAAAAAGCAGTGATTACGCCAATATTAAAGACATTTTTCGTCCCGGACACGCTGATTA TACATATTTCAAAAAATATGGTATCCGAGATTATAGAGGGGGAGGAAGAAGTTCAGCAAGAGAAAGTGTAGCAAGAGTAG CAGCTGGAGCTGTAGCACAAATGCTTTTGCGCGAATTTGACATAAATGTCCAAAGTGGCATATGCTCAATTGGCAATATC ACAGGGAAGCAATATGATTTTGCATACGCACTCAAAAGTGAAATTTATGCACTTGACAAAGAATGTGAAGAATCACAAAA AGCGCTTATTGAAAATGCTAAAAGAAAACACGATAGCATTGGTGGAAGTGCTCTCATTCGTGTAGAGGGACTTCCTGCAG GATTGGGCGAACCACTTTATCATCGCCTCGATGGAGCGTTGGGAGAAGCACTTATGGGGCTTAATGCTGTTAAAGCGGTA GAAATAGGCGATGGAATCATCTCTTGCACCCAATATGGAAGTGAGCATAATGACCAAATGGATAAAAACGGCTTTAAAAG TAACCATAGTGGTGGTATTTTGGGAGGTATAAGTAATGGCAATGCACTTCTTGTTAAAGCACATTTCAAACCTACACCGA GTATTTTTATACCCCAAGAGACGCTTGATATACACTTACAAGAACAAACTTGCCAAATCAAAGGACGACACGACCCGTGT GTAGCAGTTCGTGGCAGTATAGTCGCGCAAGCAATGGTTGCTCTCGTCCTCGCAGATATGCTTTTATTACACGCTACTTC ACAACTTTGTTTTTTAAAAAAGATTTATAAGCAATAA
Upstream 100 bases:
>100_bases CAAGCGGGAACTCAAAAAAAGAGGCGCAACAAAAAAGCGCGCAAATTGCTTATAAAAAACTCTATTCAAAGATGAATAAA ACTCATCATAAAGGGGAAAA
Downstream 100 bases:
>100_bases CAAAATTTATATTATAGTTATTTTAAAGCAAGAAGATTCTATAATCACACTTCCTTAACACAATAGGAGACAATAAATGA TAACACTCAAAGAAGCTCTA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MNTFGKSFRVSTFGESHGEGIGCVIDGIPAGLHIDELFIESMMTRRAPGRNQYTTQRKESDKVQILSGVFEGLSTGTPIG MWIANTGTKSSDYANIKDIFRPGHADYTYFKKYGIRDYRGGGRSSARESVARVAAGAVAQMLLREFDINVQSGICSIGNI TGKQYDFAYALKSEIYALDKECEESQKALIENAKRKHDSIGGSALIRVEGLPAGLGEPLYHRLDGALGEALMGLNAVKAV EIGDGIISCTQYGSEHNDQMDKNGFKSNHSGGILGGISNGNALLVKAHFKPTPSIFIPQETLDIHLQEQTCQIKGRHDPC VAVRGSIVAQAMVALVLADMLLLHATSQLCFLKKIYKQ
Sequences:
>Translated_358_residues MNTFGKSFRVSTFGESHGEGIGCVIDGIPAGLHIDELFIESMMTRRAPGRNQYTTQRKESDKVQILSGVFEGLSTGTPIG MWIANTGTKSSDYANIKDIFRPGHADYTYFKKYGIRDYRGGGRSSARESVARVAAGAVAQMLLREFDINVQSGICSIGNI TGKQYDFAYALKSEIYALDKECEESQKALIENAKRKHDSIGGSALIRVEGLPAGLGEPLYHRLDGALGEALMGLNAVKAV EIGDGIISCTQYGSEHNDQMDKNGFKSNHSGGILGGISNGNALLVKAHFKPTPSIFIPQETLDIHLQEQTCQIKGRHDPC VAVRGSIVAQAMVALVLADMLLLHATSQLCFLKKIYKQ >Mature_358_residues MNTFGKSFRVSTFGESHGEGIGCVIDGIPAGLHIDELFIESMMTRRAPGRNQYTTQRKESDKVQILSGVFEGLSTGTPIG MWIANTGTKSSDYANIKDIFRPGHADYTYFKKYGIRDYRGGGRSSARESVARVAAGAVAQMLLREFDINVQSGICSIGNI TGKQYDFAYALKSEIYALDKECEESQKALIENAKRKHDSIGGSALIRVEGLPAGLGEPLYHRLDGALGEALMGLNAVKAV EIGDGIISCTQYGSEHNDQMDKNGFKSNHSGGILGGISNGNALLVKAHFKPTPSIFIPQETLDIHLQEQTCQIKGRHDPC VAVRGSIVAQAMVALVLADMLLLHATSQLCFLKKIYKQ
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=342, Percent_Identity=49.4152046783626, Blast_Score=327, Evalue=6e-91, Organism=Saccharomyces cerevisiae, GI6321290, Length=365, Percent_Identity=38.6301369863014, Blast_Score=258, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_HELHP (Q7VIA8)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860231.1 - ProteinModelPortal: Q7VIA8 - SMR: Q7VIA8 - GeneID: 1493754 - GenomeReviews: AE017125_GR - KEGG: hhe:HH0700 - NMPDR: fig|235279.1.peg.700 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - BioCyc: HHEP235279:HH_0700-MONOMER - BRENDA: 4.2.3.5 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 38836; Mature: 38836
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFGKSFRVSTFGESHGEGIGCVIDGIPAGLHIDELFIESMMTRRAPGRNQYTTQRKES CCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC DKVQILSGVFEGLSTGTPIGMWIANTGTKSSDYANIKDIFRPGHADYTYFKKYGIRDYRG CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCC GGRSSARESVARVAAGAVAQMLLREFDINVQSGICSIGNITGKQYDFAYALKSEIYALDK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCHHHHHHHHHHHHHHH ECEESQKALIENAKRKHDSIGGSALIRVEGLPAGLGEPLYHRLDGALGEALMGLNAVKAV HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHEEE EIGDGIISCTQYGSEHNDQMDKNGFKSNHSGGILGGISNGNALLVKAHFKPTPSIFIPQE ECCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEECCH TLDIHLQEQTCQIKGRHDPCVAVRGSIVAQAMVALVLADMLLLHATSQLCFLKKIYKQ HEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTFGKSFRVSTFGESHGEGIGCVIDGIPAGLHIDELFIESMMTRRAPGRNQYTTQRKES CCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC DKVQILSGVFEGLSTGTPIGMWIANTGTKSSDYANIKDIFRPGHADYTYFKKYGIRDYRG CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCC GGRSSARESVARVAAGAVAQMLLREFDINVQSGICSIGNITGKQYDFAYALKSEIYALDK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCHHHHHHHHHHHHHHH ECEESQKALIENAKRKHDSIGGSALIRVEGLPAGLGEPLYHRLDGALGEALMGLNAVKAV HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHEEE EIGDGIISCTQYGSEHNDQMDKNGFKSNHSGGILGGISNGNALLVKAHFKPTPSIFIPQE ECCCCHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEECCH TLDIHLQEQTCQIKGRHDPCVAVRGSIVAQAMVALVLADMLLLHATSQLCFLKKIYKQ HEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954