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The map label for this gene is 32266137

Identifier: 32266137

GI number: 32266137

Start: 617111

End: 617947

Strand: Direct

Name: 32266137

Synonym: HH0638

Alternate gene names: NA

Gene position: 617111-617947 (Clockwise)

Preceding gene: 32266136

Following gene: 32266138

Centisome position: 34.3

GC content: 35.36

Gene sequence:

>837_bases
ATGCAGCAAGATAAACAAAATACACATCAAAAAAACCCAAAAGTGGGAGAGATTTATGAGCTATGCAATACTATCTCGCC
TTTTAACACACAAGAATCTTGGGATAAAAGTGGTTTAAATCTCGGTAGTTTTCATAATGAATATACAGATATTGTGCTTT
GTCTTGAGGTAAATCTCGCTATTGCACTCTCGCTTAAACCAAATACACTTCTTATTACACACCACCCTTTGTTTTTCAAT
CCTACTGCTCAAATGATAACAGATACATACCCTCATAATATCGCTGCCATTCTTATTCGTAAAAATTGCTCACTCATTAG
TCTTCACACAAATTTTGATAAATCACATCTAAATACCTACCTCACACATCAAATTTTACAATGGCATCATTTTGTGCCAA
GTGAAGATGGGCTTTTAATGAGTGGGAAGATTCCGCCTATATCACTTCAAAAATTGGCTCAAGATGTATGCAAAAAGCTG
AATGCGCCTAGTGTGAGTTTCGTGCAAGGCGATGATATAACATTTCTCAATCAAGAATCTCAAGCATCTCATACAAATGA
TGCCATTACAGAAGCTTATGTTGTATGCGGAAGTGGTTGCTCACTCCTTTCTCAAATCCAACCAAATCCACATATATGTT
TGCTTACAGGTGATATCAAACATCACGATGCAATGATGGCTAAAAGTATGGGCATAAGCCTTATAGACATAGGACACTAC
GAGAGTGAAAAATATTTTGTGGAAATTTTTGATTCTATTTTGCAAAATGTGGGATATAACGCTATAATTATGGATTGTAA
AAATCCATTCTATTTTTGCCAAGCTAAGCATCAATAG

Upstream 100 bases:

>100_bases
AGTGCAAGCGTGCTTTTTTCAAATTGGCTCAATTTTTCTGTATATCAAGATACACCTTTTGTTTTATAATTAGTTTATAT
TTTCATAAATAAGGATTTTT

Downstream 100 bases:

>100_bases
ATTCTAATCACCTAACCAAAAAGGAAATCCCGATGAATAAGCATTTAAAAGAACTTATAGAAGTGGCGAATTTTGACAAA
CAAATTGATGACTTAGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MQQDKQNTHQKNPKVGEIYELCNTISPFNTQESWDKSGLNLGSFHNEYTDIVLCLEVNLAIALSLKPNTLLITHHPLFFN
PTAQMITDTYPHNIAAILIRKNCSLISLHTNFDKSHLNTYLTHQILQWHHFVPSEDGLLMSGKIPPISLQKLAQDVCKKL
NAPSVSFVQGDDITFLNQESQASHTNDAITEAYVVCGSGCSLLSQIQPNPHICLLTGDIKHHDAMMAKSMGISLIDIGHY
ESEKYFVEIFDSILQNVGYNAIIMDCKNPFYFCQAKHQ

Sequences:

>Translated_278_residues
MQQDKQNTHQKNPKVGEIYELCNTISPFNTQESWDKSGLNLGSFHNEYTDIVLCLEVNLAIALSLKPNTLLITHHPLFFN
PTAQMITDTYPHNIAAILIRKNCSLISLHTNFDKSHLNTYLTHQILQWHHFVPSEDGLLMSGKIPPISLQKLAQDVCKKL
NAPSVSFVQGDDITFLNQESQASHTNDAITEAYVVCGSGCSLLSQIQPNPHICLLTGDIKHHDAMMAKSMGISLIDIGHY
ESEKYFVEIFDSILQNVGYNAIIMDCKNPFYFCQAKHQ
>Mature_278_residues
MQQDKQNTHQKNPKVGEIYELCNTISPFNTQESWDKSGLNLGSFHNEYTDIVLCLEVNLAIALSLKPNTLLITHHPLFFN
PTAQMITDTYPHNIAAILIRKNCSLISLHTNFDKSHLNTYLTHQILQWHHFVPSEDGLLMSGKIPPISLQKLAQDVCKKL
NAPSVSFVQGDDITFLNQESQASHTNDAITEAYVVCGSGCSLLSQIQPNPHICLLTGDIKHHDAMMAKSMGISLIDIGHY
ESEKYFVEIFDSILQNVGYNAIIMDCKNPFYFCQAKHQ

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 31285; Mature: 31285

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQDKQNTHQKNPKVGEIYELCNTISPFNTQESWDKSGLNLGSFHNEYTDIVLCLEVNLA
CCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEE
IALSLKPNTLLITHHPLFFNPTAQMITDTYPHNIAAILIRKNCSLISLHTNFDKSHLNTY
EEEEECCCEEEEEECCEEECCHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHH
LTHQILQWHHFVPSEDGLLMSGKIPPISLQKLAQDVCKKLNAPSVSFVQGDDITFLNQES
HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCC
QASHTNDAITEAYVVCGSGCSLLSQIQPNPHICLLTGDIKHHDAMMAKSMGISLIDIGHY
CCCCCCHHHHHEEEEECCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCC
ESEKYFVEIFDSILQNVGYNAIIMDCKNPFYFCQAKHQ
CCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCC
>Mature Secondary Structure
MQQDKQNTHQKNPKVGEIYELCNTISPFNTQESWDKSGLNLGSFHNEYTDIVLCLEVNLA
CCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEE
IALSLKPNTLLITHHPLFFNPTAQMITDTYPHNIAAILIRKNCSLISLHTNFDKSHLNTY
EEEEECCCEEEEEECCEEECCHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHH
LTHQILQWHHFVPSEDGLLMSGKIPPISLQKLAQDVCKKLNAPSVSFVQGDDITFLNQES
HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCC
QASHTNDAITEAYVVCGSGCSLLSQIQPNPHICLLTGDIKHHDAMMAKSMGISLIDIGHY
CCCCCCHHHHHEEEEECCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCC
ESEKYFVEIFDSILQNVGYNAIIMDCKNPFYFCQAKHQ
CCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]