| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266138
Identifier: 32266138
GI number: 32266138
Start: 617980
End: 618756
Strand: Direct
Name: 32266138
Synonym: HH0639
Alternate gene names: NA
Gene position: 617980-618756 (Clockwise)
Preceding gene: 32266137
Following gene: 32266139
Centisome position: 34.35
GC content: 33.33
Gene sequence:
>777_bases ATGAATAAGCATTTAAAAGAACTTATAGAAGTGGCGAATTTTGACAAACAAATTGATGACTTAGAACCCAAAATTTCCCA AGCACGTTCCGAACTTAATGAACAAATCAAACAACAAGAGCAAATTTTAAAGAATATAGAAAAACTTGATCGCGAATCTT ATAGCATTGAGCTTGAAATTTCTCATCACAACCGAAATATTCAAGATGCCTCTTCAAAACTAGAGCAAATTGGCAAAAAG CAAAAAGAAATTAAAACAGAAAAAGAAATGCGTGCTCTTGATGTAGAATCTGATATTGCTAAAGAAAATATGACTCATTC AAATAGCGAAATTGATCGTCTTGAAACACTGAAAAAAAGTAAAGAAGAAGAGAAAAAAGCCTATGAGCCAAAGCTTGAAG AGCTTAAATCTCTCATTAAAACGCTTGAAGAAAAAACACAAAGTCAAGTCCAAGAAATTAAAAAAGTGCAACAAGAATTA TTTAATAAAAAAGAAGCACTTGTGGGACAAATGGATAGTAAAATCACAAGTTTTTATGCCAAAATTAGACGTTGGGCAGG AAATACAAGCGTGGTTTGTGTTTTCAAACAGGCTTGCGGTGGTTGCTTTATCAAGCTTAATGACACTATTTATAGTGAGA TTCTTAAAGGCAATGACATTATTAACTGCCCTCATTGCGGGCGGATTCTCTATGCAAATCCCTCTTCAAAAAGCACTCAA ACACCAACAAATACAGCTGAAGAAAAACCTCAAAGCAAGAAAAAAACTAAAGCATAG
Upstream 100 bases:
>100_bases TGGGATATAACGCTATAATTATGGATTGTAAAAATCCATTCTATTTTTGCCAAGCTAAGCATCAATAGATTCTAATCACC TAACCAAAAAGGAAATCCCG
Downstream 100 bases:
>100_bases AATCTAAGAGCTTTTTGAGGAATTGTTATGGATAGAGCAGATTCTACAAAAGATTTAGATAAAAATAAAACTCCTCGTTT TCCTTTTACATATTATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNKHLKELIEVANFDKQIDDLEPKISQARSELNEQIKQQEQILKNIEKLDRESYSIELEISHHNRNIQDASSKLEQIGKK QKEIKTEKEMRALDVESDIAKENMTHSNSEIDRLETLKKSKEEEKKAYEPKLEELKSLIKTLEEKTQSQVQEIKKVQQEL FNKKEALVGQMDSKITSFYAKIRRWAGNTSVVCVFKQACGGCFIKLNDTIYSEILKGNDIINCPHCGRILYANPSSKSTQ TPTNTAEEKPQSKKKTKA
Sequences:
>Translated_258_residues MNKHLKELIEVANFDKQIDDLEPKISQARSELNEQIKQQEQILKNIEKLDRESYSIELEISHHNRNIQDASSKLEQIGKK QKEIKTEKEMRALDVESDIAKENMTHSNSEIDRLETLKKSKEEEKKAYEPKLEELKSLIKTLEEKTQSQVQEIKKVQQEL FNKKEALVGQMDSKITSFYAKIRRWAGNTSVVCVFKQACGGCFIKLNDTIYSEILKGNDIINCPHCGRILYANPSSKSTQ TPTNTAEEKPQSKKKTKA >Mature_258_residues MNKHLKELIEVANFDKQIDDLEPKISQARSELNEQIKQQEQILKNIEKLDRESYSIELEISHHNRNIQDASSKLEQIGKK QKEIKTEKEMRALDVESDIAKENMTHSNSEIDRLETLKKSKEEEKKAYEPKLEELKSLIKTLEEKTQSQVQEIKKVQQEL FNKKEALVGQMDSKITSFYAKIRRWAGNTSVVCVFKQACGGCFIKLNDTIYSEILKGNDIINCPHCGRILYANPSSKSTQ TPTNTAEEKPQSKKKTKA
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29726; Mature: 29726
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHLKELIEVANFDKQIDDLEPKISQARSELNEQIKQQEQILKNIEKLDRESYSIELEI CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE SHHNRNIQDASSKLEQIGKKQKEIKTEKEMRALDVESDIAKENMTHSNSEIDRLETLKKS ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHH KEEEKKAYEPKLEELKSLIKTLEEKTQSQVQEIKKVQQELFNKKEALVGQMDSKITSFYA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIRRWAGNTSVVCVFKQACGGCFIKLNDTIYSEILKGNDIINCPHCGRILYANPSSKSTQ HHHHHCCCCCEEEEEHHHHCCEEEEECHHHHHHHHCCCCEECCCCCCEEEEECCCCCCCC TPTNTAEEKPQSKKKTKA CCCCCHHHCCHHHHCCCC >Mature Secondary Structure MNKHLKELIEVANFDKQIDDLEPKISQARSELNEQIKQQEQILKNIEKLDRESYSIELEI CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE SHHNRNIQDASSKLEQIGKKQKEIKTEKEMRALDVESDIAKENMTHSNSEIDRLETLKKS ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHH KEEEKKAYEPKLEELKSLIKTLEEKTQSQVQEIKKVQQELFNKKEALVGQMDSKITSFYA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIRRWAGNTSVVCVFKQACGGCFIKLNDTIYSEILKGNDIINCPHCGRILYANPSSKSTQ HHHHHCCCCCEEEEEHHHHCCEEEEECHHHHHHHHCCCCEECCCCCCEEEEECCCCCCCC TPTNTAEEKPQSKKKTKA CCCCCHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA