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The map label for this gene is ftsY

Identifier: 32266089

GI number: 32266089

Start: 567657

End: 568538

Strand: Direct

Name: ftsY

Synonym: HH0590

Alternate gene names: 32266089

Gene position: 567657-568538 (Clockwise)

Preceding gene: 32266088

Following gene: 32266090

Centisome position: 31.55

GC content: 36.51

Gene sequence:

>882_bases
ATGATTTCTGCTCTTAGTAAAACACTTCAAAAAACGACTCAAAATATTACCTCGCTTCTTGGCTCTAAAAAAGATAAATG
TGCTAAAGAAGAGCTAGAAGAGATTCTAATTGAATGCGACCTTGAATATGAACTTATAGAATCCTTACTTGAAAATCTCC
CCTCTTATATATCGCGTGAGACATTAAACAAAGAGCTTTTAAAATTACTTGATATAAAAGACCAAACATCAAACTTGTCT
AACATACCACCCAAGCCTCTTGTAACGCTTATTGTAGGTGTAAATGGCGCAGGCAAAACCACAACAATTGCTAAACTTGC
TCACCTTGCTCAAACACAAAATAAAAAGGTGATGTTAGCAGCAGGAGATACATTTCGCGCAGCAGCAATAGAGCAACTTA
AACTTTGGGGAGAAAAGTTGCAGATTCCTGTAATTGCAACACAGCATATGCACGACCCAAGCGCAGTAGCATTTGATAGT
ATCAATTCTGCGATTGCTAAAAATATTGATGAACTCTATATAGATACAGCTGGGCGTTTGCACAACCACACCAATCTTAA
CAACGAGCTTTTAAAAATCGTGCGCGTAAGTCAAAAGGCTCTTGGAGATAAGCCTCTGCGCAAATTTCTTGTTCTTGATG
GCACACAAGGAAGTTCAGCTATTAATCAAGTGCGGATATTTTCAAAAAATATTGATTTTGATGGTATTATCATCACAAAA
CTTGATGGCACAAGCAAAGGTGGTGCGCTCTTTAGTATCGTAAATGAGCTAAACATACCTATTTTATACATTGGTATAGG
CGAAAGGGAAAATGACCTTATCCCTTTTGATTCTAAAGAATATGTAAGAATCTTGCTTGATAGTATTTATCAAGGACATT
AA

Upstream 100 bases:

>100_bases
AAGCTCAAAGCGAAATGCAAAATCTTACCCCAGAAGAACAAGAAGATATGGACAACACAGCTGATACTCTTAGCCCAAAT
ATCCCAGCACAAGAAGCTCA

Downstream 100 bases:

>100_bases
TGGCAAAAAAAACTTCCATTTTTGAATGTCAATTTTGCGGGTGGCAAAGTGCAAAATGGCTTGGTAAATGCAGTAGCTGT
GGAAGTTGGGATTCGCTTAT

Product: signal recognition particle-docking GTPase FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MISALSKTLQKTTQNITSLLGSKKDKCAKEELEEILIECDLEYELIESLLENLPSYISRETLNKELLKLLDIKDQTSNLS
NIPPKPLVTLIVGVNGAGKTTTIAKLAHLAQTQNKKVMLAAGDTFRAAAIEQLKLWGEKLQIPVIATQHMHDPSAVAFDS
INSAIAKNIDELYIDTAGRLHNHTNLNNELLKIVRVSQKALGDKPLRKFLVLDGTQGSSAINQVRIFSKNIDFDGIIITK
LDGTSKGGALFSIVNELNIPILYIGIGERENDLIPFDSKEYVRILLDSIYQGH

Sequences:

>Translated_293_residues
MISALSKTLQKTTQNITSLLGSKKDKCAKEELEEILIECDLEYELIESLLENLPSYISRETLNKELLKLLDIKDQTSNLS
NIPPKPLVTLIVGVNGAGKTTTIAKLAHLAQTQNKKVMLAAGDTFRAAAIEQLKLWGEKLQIPVIATQHMHDPSAVAFDS
INSAIAKNIDELYIDTAGRLHNHTNLNNELLKIVRVSQKALGDKPLRKFLVLDGTQGSSAINQVRIFSKNIDFDGIIITK
LDGTSKGGALFSIVNELNIPILYIGIGERENDLIPFDSKEYVRILLDSIYQGH
>Mature_293_residues
MISALSKTLQKTTQNITSLLGSKKDKCAKEELEEILIECDLEYELIESLLENLPSYISRETLNKELLKLLDIKDQTSNLS
NIPPKPLVTLIVGVNGAGKTTTIAKLAHLAQTQNKKVMLAAGDTFRAAAIEQLKLWGEKLQIPVIATQHMHDPSAVAFDS
INSAIAKNIDELYIDTAGRLHNHTNLNNELLKIVRVSQKALGDKPLRKFLVLDGTQGSSAINQVRIFSKNIDFDGIIITK
LDGTSKGGALFSIVNELNIPILYIGIGERENDLIPFDSKEYVRILLDSIYQGH

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=273, Percent_Identity=32.2344322344322, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI226371618, Length=225, Percent_Identity=34.2222222222222, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI23308697, Length=334, Percent_Identity=25.1497005988024, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI295424842, Length=334, Percent_Identity=25.1497005988024, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=30.3703703703704, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI1789874, Length=301, Percent_Identity=42.8571428571429, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1788963, Length=294, Percent_Identity=28.9115646258503, Blast_Score=125, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17539958, Length=271, Percent_Identity=30.9963099630996, Blast_Score=127, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI193206261, Length=221, Percent_Identity=30.316742081448, Blast_Score=93, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6325345, Length=270, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=3e-32,
Organism=Drosophila melanogaster, GI17647949, Length=299, Percent_Identity=32.1070234113712, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24641198, Length=246, Percent_Identity=28.0487804878049, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 32369; Mature: 32369

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISALSKTLQKTTQNITSLLGSKKDKCAKEELEEILIECDLEYELIESLLENLPSYISRE
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TLNKELLKLLDIKDQTSNLSNIPPKPLVTLIVGVNGAGKTTTIAKLAHLAQTQNKKVMLA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
AGDTFRAAAIEQLKLWGEKLQIPVIATQHMHDPSAVAFDSINSAIAKNIDELYIDTAGRL
ECCCHHHHHHHHHHHHHHHEECEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCHHH
HNHTNLNNELLKIVRVSQKALGDKPLRKFLVLDGTQGSSAINQVRIFSKNIDFDGIIITK
CCCCCCHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHEECCCCCCCEEEEE
LDGTSKGGALFSIVNELNIPILYIGIGERENDLIPFDSKEYVRILLDSIYQGH
ECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISALSKTLQKTTQNITSLLGSKKDKCAKEELEEILIECDLEYELIESLLENLPSYISRE
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TLNKELLKLLDIKDQTSNLSNIPPKPLVTLIVGVNGAGKTTTIAKLAHLAQTQNKKVMLA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
AGDTFRAAAIEQLKLWGEKLQIPVIATQHMHDPSAVAFDSINSAIAKNIDELYIDTAGRL
ECCCHHHHHHHHHHHHHHHEECEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCHHH
HNHTNLNNELLKIVRVSQKALGDKPLRKFLVLDGTQGSSAINQVRIFSKNIDFDGIIITK
CCCCCCHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHEECCCCCCCEEEEE
LDGTSKGGALFSIVNELNIPILYIGIGERENDLIPFDSKEYVRILLDSIYQGH
ECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]