| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266088
Identifier: 32266088
GI number: 32266088
Start: 566971
End: 567660
Strand: Direct
Name: 32266088
Synonym: HH0589
Alternate gene names: NA
Gene position: 566971-567660 (Clockwise)
Preceding gene: 32266085
Following gene: 32266089
Centisome position: 31.51
GC content: 34.06
Gene sequence:
>690_bases ATGAAAATAGCACAGATTCTCAATACTCGGCATATTACACATCTACTTATAGGGTTTTTATTGGTTGCGACATTAGGAGC GTGTAGCGATGAAGGCGATAGAGATAAAGATGTTTTTGGTTTTGAGGGAAACAAAGATGAGATTTTAAGCATTGAAGTTA CAAACACTCAAAATGAATCTTTGCGCTTTAAGACAAATCAAACTCAAAGTATCTTTAAAAGCGAAACACAACGTCCTACT TTACTCTTTTTTATTTCTAAAGATTGTATTGAGTGCCAAAATGAATTGCTCCATATTTTAGATTTATATAATAAATATCA AGAATTTATCTCTATTATCGCTATTAGCCCAAAAGAGGATATTGCACATCTTCAACAAGAAATTGATGCCCTCAATCCAC AATTTAAGCTTTATGCGCCAACAGATAATAAGAATCTGCTTAATTTTCTTAATAAAGATGACAAACAAAGCTATATTGCA CTCTATGATATACAAGGGGAAAAAGTTATTGATTATGTAGGACTTGTGCCAGAAGAGATGATAGAGCTTGATATACGCTA TCAGATTCAAGACCAGCTTGATGCAAAAGCTCAAAGCGAAATGCAAAATCTTACCCCAGAAGAACAAGAAGATATGGACA ACACAGCTGATACTCTTAGCCCAAATATCCCAGCACAAGAAGCTCAATGA
Upstream 100 bases:
>100_bases TCGTGCCTTTGCACTTAATCTAAAGTCTTGTTTGGTAATTGTTAATCCTTTTTTTGGGTATAATGATACCCCAAAAGATA AAAATGGAGAGTAAAATAGT
Downstream 100 bases:
>100_bases TTTCTGCTCTTAGTAAAACACTTCAAAAAACGACTCAAAATATTACCTCGCTTCTTGGCTCTAAAAAAGATAAATGTGCT AAAGAAGAGCTAGAAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKIAQILNTRHITHLLIGFLLVATLGACSDEGDRDKDVFGFEGNKDEILSIEVTNTQNESLRFKTNQTQSIFKSETQRPT LLFFISKDCIECQNELLHILDLYNKYQEFISIIAISPKEDIAHLQQEIDALNPQFKLYAPTDNKNLLNFLNKDDKQSYIA LYDIQGEKVIDYVGLVPEEMIELDIRYQIQDQLDAKAQSEMQNLTPEEQEDMDNTADTLSPNIPAQEAQ
Sequences:
>Translated_229_residues MKIAQILNTRHITHLLIGFLLVATLGACSDEGDRDKDVFGFEGNKDEILSIEVTNTQNESLRFKTNQTQSIFKSETQRPT LLFFISKDCIECQNELLHILDLYNKYQEFISIIAISPKEDIAHLQQEIDALNPQFKLYAPTDNKNLLNFLNKDDKQSYIA LYDIQGEKVIDYVGLVPEEMIELDIRYQIQDQLDAKAQSEMQNLTPEEQEDMDNTADTLSPNIPAQEAQ >Mature_229_residues MKIAQILNTRHITHLLIGFLLVATLGACSDEGDRDKDVFGFEGNKDEILSIEVTNTQNESLRFKTNQTQSIFKSETQRPT LLFFISKDCIECQNELLHILDLYNKYQEFISIIAISPKEDIAHLQQEIDALNPQFKLYAPTDNKNLLNFLNKDDKQSYIA LYDIQGEKVIDYVGLVPEEMIELDIRYQIQDQLDAKAQSEMQNLTPEEQEDMDNTADTLSPNIPAQEAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26261; Mature: 26261
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAQILNTRHITHLLIGFLLVATLGACSDEGDRDKDVFGFEGNKDEILSIEVTNTQNES CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC LRFKTNQTQSIFKSETQRPTLLFFISKDCIECQNELLHILDLYNKYQEFISIIAISPKED EEEECCCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IAHLQQEIDALNPQFKLYAPTDNKNLLNFLNKDDKQSYIALYDIQGEKVIDYVGLVPEEM HHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHH IELDIRYQIQDQLDAKAQSEMQNLTPEEQEDMDNTADTLSPNIPAQEAQ HHHHHHEEEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MKIAQILNTRHITHLLIGFLLVATLGACSDEGDRDKDVFGFEGNKDEILSIEVTNTQNES CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC LRFKTNQTQSIFKSETQRPTLLFFISKDCIECQNELLHILDLYNKYQEFISIIAISPKED EEEECCCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IAHLQQEIDALNPQFKLYAPTDNKNLLNFLNKDDKQSYIALYDIQGEKVIDYVGLVPEEM HHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHH IELDIRYQIQDQLDAKAQSEMQNLTPEEQEDMDNTADTLSPNIPAQEAQ HHHHHHEEEHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA