| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is cadA [H]
Identifier: 32266085
GI number: 32266085
Start: 562622
End: 564709
Strand: Direct
Name: cadA [H]
Synonym: HH0586
Alternate gene names: 32266085
Gene position: 562622-564709 (Clockwise)
Preceding gene: 32266083
Following gene: 32266088
Centisome position: 31.27
GC content: 36.59
Gene sequence:
>2088_bases ATGAAGCAGCATATTCTTATACTTAAAGGTATTGATTGCGCAAATTGTGCACAGCGCATAGAAGATGCACTCAATGCACT CCCAAATACAAAAGAAGCTAATATTGATTTTAGCACGAATATGCTTTATATCTATACAGATAATCTCACAAAAGTTATAC ACACTATCACACATATAGAACCACAAGTGAGCGTATTAGAAACATCTTCATCTTATATCTCTCCACTACAAGAAGATACA AAACATTCACACGAATTACTCTCTATAAGTATTTTTATAGCCATATTCATCTTTTGTATGGCTGCACTTCATATAGATTC TCTATATATTCCTCCCATTGTTGCTTATATTTTACTTAGTATAGTTTATATAGGTTCAGGAATACCTATATTTAGCGCAA CTTGGAGAAATTGCAAAAATAAACTATTTTTTGATGAACACTCCCTTATGCTTTTTGCCACACTCGCAGCATTGTGTATT GGTGAGATAAGCGAAGCTGTAGCAGTTATGCTTTTTTTTCGTGTAGGTGAATTTTTAGAATCTCTTGCAGTGCAAAAATC TAAACGCTCTATCAATGCACTTTTGCAAATTATGCCTGATATAGCACACAAAAAGCATAATGACACTTTACAAGACTTGC ACCCACAAGAATTGAGTGTAGGAGATATTATCGTTATTAAGGTAGGAGAAAAAATCCCCACTGATGGCATAGTGCTTAAA GGAAAAAGTTATTTAGATATGCGCTCAATTAATGGAGAGAGCGTGCCTGTGAGTATAAATGAGGGGCAAAGTATTATCGC AGGAGCAATCAATACAACTGCTATGCTTGAAGTGCGCGTAGAAAAACCCTTTAAAGATTCTCATATTGCTAAAATTGCCA AGCTTACACAGGAAGCAAGCGCAAATAAAGCCAAAACGCAAAAAGTAATTACTTCTTTTGCTCGTATTTATACGCCTATT ATTTTTTTTCTTTCTCTAAGTCTCGCTCTTATCCCACCTCTTTTTGATGAACAATGGCACGAATGGGTTTATCGCGCACT TGTAGTAATGATGATAAGCTGTCCTTGTGCACTTGTTATTGCTGTGCCTTTGGGATACTTCGCTGCCATTGGGCAAGCAA GTGCCAAAGGGATTTTATTTAAAGGCTCAACTTACCTTGAAACCCTTGCTCAAGTAAAAAATATTATCTTTGATAAAACA GGAACGCTTACGCTTGGCACATTTGAAATTCTTAGTATTGTGCCAAATGAAGGCTACACGCAGCAAGACTTACTTGAAAT TGCTTCATTAGCAGAACAAAACTCAAATCACCCAATAGCTACTTGTATCAAAAATCACCTTAACACAATGTGCCATATAG AATCTTATGAGGAAATAAGTGGTAAGGGTGTGCGACTTTTGAGTGATAAAGGCGAGATTCTCGCAGGAAATGCTGCGCTT ATGCAGGAAAATCATATCTCCTTTACACCTATACATACACCCCATACAACCATATATGTCGCACTTAAAGGAACTTATGT GGGGCATATCCTTATCGGAGATAAAATTAAAGAGGGAATAAAAGATGATTTAAAAATGCTCAAACACTATGGTATAAAAC ATTTCGCAATTCTTAGTGGAGATAATCAAACCAATGTAGATTGCCTTGCTAAAGAGCTAGGTATATCTCACGCTTATGGG AATCTTTTACCCGCACAAAAAGAACAAAAACTAGCTGAATTTATGGAACAATGGCAGGAAAAAATTGCATTTGTGGGTGA TGGCATTAATGATGCAATAGTGCTTAGACGCAGTGATGTGGGCATAAGTATCAATACCGGAGAAACTAGTAATGATATTA GCAAAGAAAGTGCGGATATCATTTTACAACATAATTCGCTTCAAGGGCTTGTGCAAGCATTTAAAATCGCTCATCATACA CGCTCTATTACTTGGCAAAATATTAGCTTTGCACTAGCAAGCAAACTCGTGCTGATTATTTTGAGTATAATGGGCATAGC AAATATGTGGCTTGCTGTATTTGGTGATGTCGGCATAGCACTTTTAGCACTTTTGAATGCTATGCGCCCTCCACGCTCTA AAAATTAA
Upstream 100 bases:
>100_bases TTTTATTCTGTTCTCATTTATTTTATACATATACCCCCTATATGTATATTTACAAATTTATGCCATAATCATATCTATTT ATAGAATATAAGGATTTTTT
Downstream 100 bases:
>100_bases GCCTTTGCATTCCAAGTATGTTTTCTTTATTTTTTATTTGTTAATTCCATTACGCATCTGCTCTTTAAAAAACTTTTTAT CCTATCGTGCAAATTCAACC
Product: cation transport ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MKQHILILKGIDCANCAQRIEDALNALPNTKEANIDFSTNMLYIYTDNLTKVIHTITHIEPQVSVLETSSSYISPLQEDT KHSHELLSISIFIAIFIFCMAALHIDSLYIPPIVAYILLSIVYIGSGIPIFSATWRNCKNKLFFDEHSLMLFATLAALCI GEISEAVAVMLFFRVGEFLESLAVQKSKRSINALLQIMPDIAHKKHNDTLQDLHPQELSVGDIIVIKVGEKIPTDGIVLK GKSYLDMRSINGESVPVSINEGQSIIAGAINTTAMLEVRVEKPFKDSHIAKIAKLTQEASANKAKTQKVITSFARIYTPI IFFLSLSLALIPPLFDEQWHEWVYRALVVMMISCPCALVIAVPLGYFAAIGQASAKGILFKGSTYLETLAQVKNIIFDKT GTLTLGTFEILSIVPNEGYTQQDLLEIASLAEQNSNHPIATCIKNHLNTMCHIESYEEISGKGVRLLSDKGEILAGNAAL MQENHISFTPIHTPHTTIYVALKGTYVGHILIGDKIKEGIKDDLKMLKHYGIKHFAILSGDNQTNVDCLAKELGISHAYG NLLPAQKEQKLAEFMEQWQEKIAFVGDGINDAIVLRRSDVGISINTGETSNDISKESADIILQHNSLQGLVQAFKIAHHT RSITWQNISFALASKLVLIILSIMGIANMWLAVFGDVGIALLALLNAMRPPRSKN
Sequences:
>Translated_695_residues MKQHILILKGIDCANCAQRIEDALNALPNTKEANIDFSTNMLYIYTDNLTKVIHTITHIEPQVSVLETSSSYISPLQEDT KHSHELLSISIFIAIFIFCMAALHIDSLYIPPIVAYILLSIVYIGSGIPIFSATWRNCKNKLFFDEHSLMLFATLAALCI GEISEAVAVMLFFRVGEFLESLAVQKSKRSINALLQIMPDIAHKKHNDTLQDLHPQELSVGDIIVIKVGEKIPTDGIVLK GKSYLDMRSINGESVPVSINEGQSIIAGAINTTAMLEVRVEKPFKDSHIAKIAKLTQEASANKAKTQKVITSFARIYTPI IFFLSLSLALIPPLFDEQWHEWVYRALVVMMISCPCALVIAVPLGYFAAIGQASAKGILFKGSTYLETLAQVKNIIFDKT GTLTLGTFEILSIVPNEGYTQQDLLEIASLAEQNSNHPIATCIKNHLNTMCHIESYEEISGKGVRLLSDKGEILAGNAAL MQENHISFTPIHTPHTTIYVALKGTYVGHILIGDKIKEGIKDDLKMLKHYGIKHFAILSGDNQTNVDCLAKELGISHAYG NLLPAQKEQKLAEFMEQWQEKIAFVGDGINDAIVLRRSDVGISINTGETSNDISKESADIILQHNSLQGLVQAFKIAHHT RSITWQNISFALASKLVLIILSIMGIANMWLAVFGDVGIALLALLNAMRPPRSKN >Mature_695_residues MKQHILILKGIDCANCAQRIEDALNALPNTKEANIDFSTNMLYIYTDNLTKVIHTITHIEPQVSVLETSSSYISPLQEDT KHSHELLSISIFIAIFIFCMAALHIDSLYIPPIVAYILLSIVYIGSGIPIFSATWRNCKNKLFFDEHSLMLFATLAALCI GEISEAVAVMLFFRVGEFLESLAVQKSKRSINALLQIMPDIAHKKHNDTLQDLHPQELSVGDIIVIKVGEKIPTDGIVLK GKSYLDMRSINGESVPVSINEGQSIIAGAINTTAMLEVRVEKPFKDSHIAKIAKLTQEASANKAKTQKVITSFARIYTPI IFFLSLSLALIPPLFDEQWHEWVYRALVVMMISCPCALVIAVPLGYFAAIGQASAKGILFKGSTYLETLAQVKNIIFDKT GTLTLGTFEILSIVPNEGYTQQDLLEIASLAEQNSNHPIATCIKNHLNTMCHIESYEEISGKGVRLLSDKGEILAGNAAL MQENHISFTPIHTPHTTIYVALKGTYVGHILIGDKIKEGIKDDLKMLKHYGIKHFAILSGDNQTNVDCLAKELGISHAYG NLLPAQKEQKLAEFMEQWQEKIAFVGDGINDAIVLRRSDVGISINTGETSNDISKESADIILQHNSLQGLVQAFKIAHHT RSITWQNISFALASKLVLIILSIMGIANMWLAVFGDVGIALLALLNAMRPPRSKN
Specific function: Couples the hydrolysis of ATP with the transport of cadmium, zinc and cobalt out of the cell [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=594, Percent_Identity=26.2626262626263, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI115529486, Length=810, Percent_Identity=24.6913580246914, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI55743073, Length=521, Percent_Identity=26.295585412668, Blast_Score=173, Evalue=6e-43, Organism=Escherichia coli, GI1789879, Length=700, Percent_Identity=30.4285714285714, Blast_Score=315, Evalue=5e-87, Organism=Escherichia coli, GI1786691, Length=683, Percent_Identity=23.4260614934114, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI1786914, Length=510, Percent_Identity=25.2941176470588, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17556548, Length=574, Percent_Identity=27.1777003484321, Blast_Score=168, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6320475, Length=545, Percent_Identity=28.9908256880734, Blast_Score=203, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6319772, Length=521, Percent_Identity=25.9117082533589, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI221329854, Length=403, Percent_Identity=27.2952853598015, Blast_Score=135, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3; =3.6.3.5 [H]
Molecular weight: Translated: 76649; Mature: 76649
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQHILILKGIDCANCAQRIEDALNALPNTKEANIDFSTNMLYIYTDNLTKVIHTITHIE CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCHHHHHHHHHHCC PQVSVLETSSSYISPLQEDTKHSHELLSISIFIAIFIFCMAALHIDSLYIPPIVAYILLS CCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVYIGSGIPIFSATWRNCKNKLFFDEHSLMLFATLAALCIGEISEAVAVMLFFRVGEFLE HHHHCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAVQKSKRSINALLQIMPDIAHKKHNDTLQDLHPQELSVGDIIVIKVGEKIPTDGIVLK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCEEEC GKSYLDMRSINGESVPVSINEGQSIIAGAINTTAMLEVRVEKPFKDSHIAKIAKLTQEAS CCCCEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHC ANKAKTQKVITSFARIYTPIIFFLSLSLALIPPLFDEQWHEWVYRALVVMMISCPCALVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH AVPLGYFAAIGQASAKGILFKGSTYLETLAQVKNIIFDKTGTLTLGTFEILSIVPNEGYT HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEECCEEEHEECCCCCCC QQDLLEIASLAEQNSNHPIATCIKNHLNTMCHIESYEEISGKGVRLLSDKGEILAGNAAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCHHHHCCCCEEEECCCCCEEECCHHH MQENHISFTPIHTPHTTIYVALKGTYVGHILIGDKIKEGIKDDLKMLKHYGIKHFAILSG EECCCCEECCCCCCCCEEEEEEECCEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEC DNQTNVDCLAKELGISHAYGNLLPAQKEQKLAEFMEQWQEKIAFVGDGINDAIVLRRSDV CCCCCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC GISINTGETSNDISKESADIILQHNSLQGLVQAFKIAHHTRSITWQNISFALASKLVLII CEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH LSIMGIANMWLAVFGDVGIALLALLNAMRPPRSKN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKQHILILKGIDCANCAQRIEDALNALPNTKEANIDFSTNMLYIYTDNLTKVIHTITHIE CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCHHHHHHHHHHCC PQVSVLETSSSYISPLQEDTKHSHELLSISIFIAIFIFCMAALHIDSLYIPPIVAYILLS CCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IVYIGSGIPIFSATWRNCKNKLFFDEHSLMLFATLAALCIGEISEAVAVMLFFRVGEFLE HHHHCCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAVQKSKRSINALLQIMPDIAHKKHNDTLQDLHPQELSVGDIIVIKVGEKIPTDGIVLK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCEEEC GKSYLDMRSINGESVPVSINEGQSIIAGAINTTAMLEVRVEKPFKDSHIAKIAKLTQEAS CCCCEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHC ANKAKTQKVITSFARIYTPIIFFLSLSLALIPPLFDEQWHEWVYRALVVMMISCPCALVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHH AVPLGYFAAIGQASAKGILFKGSTYLETLAQVKNIIFDKTGTLTLGTFEILSIVPNEGYT HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEECCEEEHEECCCCCCC QQDLLEIASLAEQNSNHPIATCIKNHLNTMCHIESYEEISGKGVRLLSDKGEILAGNAAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCHHHHCCCCEEEECCCCCEEECCHHH MQENHISFTPIHTPHTTIYVALKGTYVGHILIGDKIKEGIKDDLKMLKHYGIKHFAILSG EECCCCEECCCCCCCCEEEEEEECCEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEC DNQTNVDCLAKELGISHAYGNLLPAQKEQKLAEFMEQWQEKIAFVGDGINDAIVLRRSDV CCCCCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC GISINTGETSNDISKESADIILQHNSLQGLVQAFKIAHHTRSITWQNISFALASKLVLII CEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH LSIMGIANMWLAVFGDVGIALLALLNAMRPPRSKN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]