| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is thrC
Identifier: 32266026
GI number: 32266026
Start: 507717
End: 509261
Strand: Direct
Name: thrC
Synonym: HH0527
Alternate gene names: 32266026
Gene position: 507717-509261 (Clockwise)
Preceding gene: 32266025
Following gene: 32266027
Centisome position: 28.22
GC content: 37.67
Gene sequence:
>1545_bases ATGAATACATATGATGAGAATCTCTTATATTCCACGCGAGATGATACAGCCTTTGGCGTAAGCTTTCAACACGCTTTATT ACACCCGAATGCACAACATAATGGGCTTTATACCTTTACCAAACTCCCTCATATCAGCCTAGAGGACATTGAAAATTTTA CAAACCTTACTTATACCAAGCTGTGCGTAGATATTTTTAATCGCTTAAAACTTGGAATCCATAGAAGTGTGCTTGAAGAA GCACTTTTAAGCTATAAAAATTTTGATGATTCTTATAATCCTGCTCCACTTAAAGTGGTAAATGAGAATCTCTTTATGCT TAATCTCTTCTCTGGTCCTACGCGTGCTTTTAAAGATATGGCACTTCAACCCTTTGGACGTTTGTTTGCACATCTTGCTA CGCAAGATACAAGACCCTATCTTATTCTCACTGCCACAAGCGGTGATACCGGACCTGCAACCTTGCAGAGCTTTGCAAAT CAACCTCATATCAGGGTTGTGTGCATTTATCCTTATGGAGGCACTAGCGATGTGCAGCGATTACAAATGACAACTCATAC CGCACCAAATGTAAAAGTTATTGGTATTGAGGGGGATTTTGATGGAGCGCAAAGTGCATTAAAAAAACTTATCGCAAATG TAGATTTTGTAAAAAAACTCAAAGAGCAAGGATTTGCGCTCTCTGCTGCAAATTCTGTGAATATTGGACGCATTGCATTT CAAATCATTTATTATTTTTGGGCGTATGTAAAATTACTTAAAGATGGACATATTACACTTGGGGAAAAGATCTCTGTTGT CGTGCCAAGTGGCAACTTTGGCAATATTTTAGGAGCGTTTTTTGCAAAAAAAATGGGTTTACCCCTTGAGCGTCTTGTGA GCGCTTCTAATGCAAATAATATCTTAAGTGATTTTATAAACACGGGTGTATATGATATTTCTAAGCGAAACTTAATTAAA ACCAAATCCCCTGCTATGGATATTTTAAAAAGTTCAAATGTAGAGAGAGTGCTTTATGCACTCTTTGGCGCACAACGCAC AAAGCAATTAATGGATAGCCTTGATAAAAAAGATTTTTATAGCCTCACTGCTGAAGAGTTAAGCTTACTTCAGCAAGATT TTAGTGCATTTGAATGTGATGATAAAATGTGTATGCAGAGCATTGCGCAAGGATTCAAAGAAGGATTACTACTTGACCCG CATAGTGCGATTGCTTATTTTGTAGCAAAAAATTTGCAAAAAAGTAGTGTAATTGGCAAAAGTGTATTTCTTGCCACAGC AGAATGGAGTAAATTCGCCCCAAGTGTGAGAGAAGCACTCAAAGAAGCAGACATCATTAAAAACACACAAGAAGCTTATG AAATAAGCGATAAACAAGCCATTGATGAGATTTGCTCACTCTCTTGTGCCAATAATCCTATCAAAGCACCCGAGCAGATT CTCCAACTTTTTAGCAAAAAAGAAGTGCAGCAAGACATTATCCCTATTCCACAGCTAGAGATGTGTATAATGCGATGGGT GAGATGTTCTCTCAAGCATTCTTAA
Upstream 100 bases:
>100_bases GCTTTCTATCAAAGAAGCGGGGAAGCAATCTTAAACTTTATTACCCTAAAAAAATCAAAATATGCTACAATGTGTCCATT TTAAGGCATAAGGAACATAA
Downstream 100 bases:
>100_bases AATTAATACAAAATATGGTAAAATGCGCTATAAATCGCTTTTAAATGTGTATAAAATGCTAAATGAAAAGATATAGGAGC AAAAATGGATTTTGTAAGCG
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MNTYDENLLYSTRDDTAFGVSFQHALLHPNAQHNGLYTFTKLPHISLEDIENFTNLTYTKLCVDIFNRLKLGIHRSVLEE ALLSYKNFDDSYNPAPLKVVNENLFMLNLFSGPTRAFKDMALQPFGRLFAHLATQDTRPYLILTATSGDTGPATLQSFAN QPHIRVVCIYPYGGTSDVQRLQMTTHTAPNVKVIGIEGDFDGAQSALKKLIANVDFVKKLKEQGFALSAANSVNIGRIAF QIIYYFWAYVKLLKDGHITLGEKISVVVPSGNFGNILGAFFAKKMGLPLERLVSASNANNILSDFINTGVYDISKRNLIK TKSPAMDILKSSNVERVLYALFGAQRTKQLMDSLDKKDFYSLTAEELSLLQQDFSAFECDDKMCMQSIAQGFKEGLLLDP HSAIAYFVAKNLQKSSVIGKSVFLATAEWSKFAPSVREALKEADIIKNTQEAYEISDKQAIDEICSLSCANNPIKAPEQI LQLFSKKEVQQDIIPIPQLEMCIMRWVRCSLKHS
Sequences:
>Translated_514_residues MNTYDENLLYSTRDDTAFGVSFQHALLHPNAQHNGLYTFTKLPHISLEDIENFTNLTYTKLCVDIFNRLKLGIHRSVLEE ALLSYKNFDDSYNPAPLKVVNENLFMLNLFSGPTRAFKDMALQPFGRLFAHLATQDTRPYLILTATSGDTGPATLQSFAN QPHIRVVCIYPYGGTSDVQRLQMTTHTAPNVKVIGIEGDFDGAQSALKKLIANVDFVKKLKEQGFALSAANSVNIGRIAF QIIYYFWAYVKLLKDGHITLGEKISVVVPSGNFGNILGAFFAKKMGLPLERLVSASNANNILSDFINTGVYDISKRNLIK TKSPAMDILKSSNVERVLYALFGAQRTKQLMDSLDKKDFYSLTAEELSLLQQDFSAFECDDKMCMQSIAQGFKEGLLLDP HSAIAYFVAKNLQKSSVIGKSVFLATAEWSKFAPSVREALKEADIIKNTQEAYEISDKQAIDEICSLSCANNPIKAPEQI LQLFSKKEVQQDIIPIPQLEMCIMRWVRCSLKHS >Mature_514_residues MNTYDENLLYSTRDDTAFGVSFQHALLHPNAQHNGLYTFTKLPHISLEDIENFTNLTYTKLCVDIFNRLKLGIHRSVLEE ALLSYKNFDDSYNPAPLKVVNENLFMLNLFSGPTRAFKDMALQPFGRLFAHLATQDTRPYLILTATSGDTGPATLQSFAN QPHIRVVCIYPYGGTSDVQRLQMTTHTAPNVKVIGIEGDFDGAQSALKKLIANVDFVKKLKEQGFALSAANSVNIGRIAF QIIYYFWAYVKLLKDGHITLGEKISVVVPSGNFGNILGAFFAKKMGLPLERLVSASNANNILSDFINTGVYDISKRNLIK TKSPAMDILKSSNVERVLYALFGAQRTKQLMDSLDKKDFYSLTAEELSLLQQDFSAFECDDKMCMQSIAQGFKEGLLLDP HSAIAYFVAKNLQKSSVIGKSVFLATAEWSKFAPSVREALKEADIIKNTQEAYEISDKQAIDEICSLSCANNPIKAPEQI LQLFSKKEVQQDIIPIPQLEMCIMRWVRCSLKHS
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=441, Percent_Identity=36.9614512471655, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI149193323, Length=443, Percent_Identity=28.2167042889391, Blast_Score=163, Evalue=4e-40, Organism=Escherichia coli, GI1786185, Length=450, Percent_Identity=29.5555555555556, Blast_Score=171, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319901, Length=471, Percent_Identity=32.6963906581741, Blast_Score=204, Evalue=2e-53,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 57497; Mature: 57497
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTYDENLLYSTRDDTAFGVSFQHALLHPNAQHNGLYTFTKLPHISLEDIENFTNLTYTK CCCCCCCCEEECCCCCEECCCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH LCVDIFNRLKLGIHRSVLEEALLSYKNFDDSYNPAPLKVVNENLFMLNLFSGPTRAFKDM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHH ALQPFGRLFAHLATQDTRPYLILTATSGDTGPATLQSFANQPHIRVVCIYPYGGTSDVQR HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHH LQMTTHTAPNVKVIGIEGDFDGAQSALKKLIANVDFVKKLKEQGFALSAANSVNIGRIAF HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCCHHHHHH QIIYYFWAYVKLLKDGHITLGEKISVVVPSGNFGNILGAFFAKKMGLPLERLVSASNANN HHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHH ILSDFINTGVYDISKRNLIKTKSPAMDILKSSNVERVLYALFGAQRTKQLMDSLDKKDFY HHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH SLTAEELSLLQQDFSAFECDDKMCMQSIAQGFKEGLLLDPHSAIAYFVAKNLQKSSVIGK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCH SVFLATAEWSKFAPSVREALKEADIIKNTQEAYEISDKQAIDEICSLSCANNPIKAPEQI HHEEEECCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LQLFSKKEVQQDIIPIPQLEMCIMRWVRCSLKHS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTYDENLLYSTRDDTAFGVSFQHALLHPNAQHNGLYTFTKLPHISLEDIENFTNLTYTK CCCCCCCCEEECCCCCEECCCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH LCVDIFNRLKLGIHRSVLEEALLSYKNFDDSYNPAPLKVVNENLFMLNLFSGPTRAFKDM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHH ALQPFGRLFAHLATQDTRPYLILTATSGDTGPATLQSFANQPHIRVVCIYPYGGTSDVQR HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHH LQMTTHTAPNVKVIGIEGDFDGAQSALKKLIANVDFVKKLKEQGFALSAANSVNIGRIAF HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCCHHHHHH QIIYYFWAYVKLLKDGHITLGEKISVVVPSGNFGNILGAFFAKKMGLPLERLVSASNANN HHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHH ILSDFINTGVYDISKRNLIKTKSPAMDILKSSNVERVLYALFGAQRTKQLMDSLDKKDFY HHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH SLTAEELSLLQQDFSAFECDDKMCMQSIAQGFKEGLLLDPHSAIAYFVAKNLQKSSVIGK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCH SVFLATAEWSKFAPSVREALKEADIIKNTQEAYEISDKQAIDEICSLSCANNPIKAPEQI HHEEEECCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LQLFSKKEVQQDIIPIPQLEMCIMRWVRCSLKHS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]