Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266021

Identifier: 32266021

GI number: 32266021

Start: 503427

End: 504737

Strand: Direct

Name: 32266021

Synonym: HH0522

Alternate gene names: NA

Gene position: 503427-504737 (Clockwise)

Preceding gene: 32266020

Following gene: 32266022

Centisome position: 27.98

GC content: 39.66

Gene sequence:

>1311_bases
ATGAAAAAAACTTTAGTAGTTGCAGCCTTAGGAGGCTTATTTGCTTCAAGCGTGAATGCTTTTGATTACAAAGTAAGTGG
TTCGGCGGAAAGTTTTACAAAATGGGGCTTTAATAATCAAAAACTTGATATACCCAACAATCAAGCTCCCACAGAGAGTT
TTACGACATTATTTGCACAGCTTAATCTCAATGCAGATTTAGGAGCTGGATTTAAAGCAGGGTTTGGCGGGGCTTTGGGT
GGATTAGCTTTTGATTCTACACGAAATGACCCTATATTGGATGGTGTAGGCTCTCCTGTTATTACTTCTTATTTTGGGAC
TGCGTGGGATAAGGCAAAAGTGCAAAATTATATGGTGCAAAATGCCTTTTTAGAGTATAGCTATAGTGATAATGTCTATT
TTAAAGCCGGACGTTATCAATCTGGCAAGGTAGGTGAGTGGTTTAGTGGCTATAATCAAGGAGCAGAGGGTTATTTACAA
GCTGGAAGTGTGAAACTCTGGGGATTTTTATCAAATCGCCGTGCCTTTGCGTATGACCAATGGTTTAATGATTTCTATCG
TGTTCACGGAATTTATGGGGGAGGGGCTACGCGTAATACCTATGCTTTGGGGCTTAATCTTACTTTTGGTGGGCTTACAC
TCTCTGGATTCTCTTATTATACACCCGGAATAGTAACTGCTCCGGGCGCAAGTATTACCTTTGATACCAATCCAAACAAA
GAATCTCAAGGCTTTAGAAGTATTACCAAACTTCGTTTTCTCGCACCTATAGCGGATATAAGCCAAAGAATCAATGCTAA
AAGGTGGGGAGAGATAGATAAACACTCTTATACACTTTATCTTGAGCAACGATTTGAAGTCAATCTATTTAACTTTGGTG
CAGGATATTATCAAAACTTTGGCAATGCAAATGAACTCATTGGACGCTGGGGAAATCCTATCTCTATTGATATTTGGACA
GGAAGCGCATATGATATAGGACAATCCTTAAATGACATCATCGGCAGAAATGCCATTACAGGTTTTGGGTATATCGGGGC
AAACTATAGCAGCTTTGATTGGAAAATATTAGGACGTGGAACAAACAGCCCGCGAAGTGCAGAACAAAGTGTGGCATTTA
TTCTTAATTATCAAATCCGCGAAGACATCGCTGTAGGTGGAAAACTAGAATGGTTTAGTGATACAACTAAGAAAGGGTAT
AGTCCTCTTGGAGGCTCTTATCAGTCTCAAAATAATGGTGGCACTATGCTTACTCAAAACCGCAAAGATGACCGATCTCA
CGCATTTTTCTATATACGCCATATATTCTAA

Upstream 100 bases:

>100_bases
ATTAAGCATAAAATGTTAGAATACATATTGTATTCTAAAAAATACGTAAATTTATTTGAAATATCTGCAAATATTTCAAA
CCTCAAATTAAGGATAAAAA

Downstream 100 bases:

>100_bases
AACTTATGGATTGTGGTATAATGCTGGCTCATAGAATCTTACCTAACATTAAGATTCTATAAATTTATCATTAATTATAT
CATTATAACAATCCTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outermembrane Protein HofE; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MKKTLVVAALGGLFASSVNAFDYKVSGSAESFTKWGFNNQKLDIPNNQAPTESFTTLFAQLNLNADLGAGFKAGFGGALG
GLAFDSTRNDPILDGVGSPVITSYFGTAWDKAKVQNYMVQNAFLEYSYSDNVYFKAGRYQSGKVGEWFSGYNQGAEGYLQ
AGSVKLWGFLSNRRAFAYDQWFNDFYRVHGIYGGGATRNTYALGLNLTFGGLTLSGFSYYTPGIVTAPGASITFDTNPNK
ESQGFRSITKLRFLAPIADISQRINAKRWGEIDKHSYTLYLEQRFEVNLFNFGAGYYQNFGNANELIGRWGNPISIDIWT
GSAYDIGQSLNDIIGRNAITGFGYIGANYSSFDWKILGRGTNSPRSAEQSVAFILNYQIREDIAVGGKLEWFSDTTKKGY
SPLGGSYQSQNNGGTMLTQNRKDDRSHAFFYIRHIF

Sequences:

>Translated_436_residues
MKKTLVVAALGGLFASSVNAFDYKVSGSAESFTKWGFNNQKLDIPNNQAPTESFTTLFAQLNLNADLGAGFKAGFGGALG
GLAFDSTRNDPILDGVGSPVITSYFGTAWDKAKVQNYMVQNAFLEYSYSDNVYFKAGRYQSGKVGEWFSGYNQGAEGYLQ
AGSVKLWGFLSNRRAFAYDQWFNDFYRVHGIYGGGATRNTYALGLNLTFGGLTLSGFSYYTPGIVTAPGASITFDTNPNK
ESQGFRSITKLRFLAPIADISQRINAKRWGEIDKHSYTLYLEQRFEVNLFNFGAGYYQNFGNANELIGRWGNPISIDIWT
GSAYDIGQSLNDIIGRNAITGFGYIGANYSSFDWKILGRGTNSPRSAEQSVAFILNYQIREDIAVGGKLEWFSDTTKKGY
SPLGGSYQSQNNGGTMLTQNRKDDRSHAFFYIRHIF
>Mature_436_residues
MKKTLVVAALGGLFASSVNAFDYKVSGSAESFTKWGFNNQKLDIPNNQAPTESFTTLFAQLNLNADLGAGFKAGFGGALG
GLAFDSTRNDPILDGVGSPVITSYFGTAWDKAKVQNYMVQNAFLEYSYSDNVYFKAGRYQSGKVGEWFSGYNQGAEGYLQ
AGSVKLWGFLSNRRAFAYDQWFNDFYRVHGIYGGGATRNTYALGLNLTFGGLTLSGFSYYTPGIVTAPGASITFDTNPNK
ESQGFRSITKLRFLAPIADISQRINAKRWGEIDKHSYTLYLEQRFEVNLFNFGAGYYQNFGNANELIGRWGNPISIDIWT
GSAYDIGQSLNDIIGRNAITGFGYIGANYSSFDWKILGRGTNSPRSAEQSVAFILNYQIREDIAVGGKLEWFSDTTKKGY
SPLGGSYQSQNNGGTMLTQNRKDDRSHAFFYIRHIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48181; Mature: 48181

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLVVAALGGLFASSVNAFDYKVSGSAESFTKWGFNNQKLDIPNNQAPTESFTTLFAQ
CCCEEEEEEHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCEEECCCCCCCCHHHHEEEEE
LNLNADLGAGFKAGFGGALGGLAFDSTRNDPILDGVGSPVITSYFGTAWDKAKVQNYMVQ
EECCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
NAFLEYSYSDNVYFKAGRYQSGKVGEWFSGYNQGAEGYLQAGSVKLWGFLSNRRAFAYDQ
HHEEEEECCCCEEEEECCCCCCCCCHHHHCCCCCCCCEEECCCEEEEEEECCCEEEEHHH
WFNDFYRVHGIYGGGATRNTYALGLNLTFGGLTLSGFSYYTPGIVTAPGASITFDTNPNK
HHHHHEEEEEEECCCCCCCEEEEEEEEEECCEEECCCCEECCCEEECCCCEEEECCCCCC
ESQGFRSITKLRFLAPIADISQRINAKRWGEIDKHSYTLYLEQRFEVNLFNFGAGYYQNF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEEEEEEEEEECCCHHHHCC
GNANELIGRWGNPISIDIWTGSAYDIGQSLNDIIGRNAITGFGYIGANYSSFDWKILGRG
CCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECC
TNSPRSAEQSVAFILNYQIREDIAVGGKLEWFSDTTKKGYSPLGGSYQSQNNGGTMLTQN
CCCCCCHHHCEEEEEEEEEHHHHCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCEEEECC
RKDDRSHAFFYIRHIF
CCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKTLVVAALGGLFASSVNAFDYKVSGSAESFTKWGFNNQKLDIPNNQAPTESFTTLFAQ
CCCEEEEEEHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCEEECCCCCCCCHHHHEEEEE
LNLNADLGAGFKAGFGGALGGLAFDSTRNDPILDGVGSPVITSYFGTAWDKAKVQNYMVQ
EECCCCCCCCCCCCCCCHHCCEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
NAFLEYSYSDNVYFKAGRYQSGKVGEWFSGYNQGAEGYLQAGSVKLWGFLSNRRAFAYDQ
HHEEEEECCCCEEEEECCCCCCCCCHHHHCCCCCCCCEEECCCEEEEEEECCCEEEEHHH
WFNDFYRVHGIYGGGATRNTYALGLNLTFGGLTLSGFSYYTPGIVTAPGASITFDTNPNK
HHHHHEEEEEEECCCCCCCEEEEEEEEEECCEEECCCCEECCCEEECCCCEEEECCCCCC
ESQGFRSITKLRFLAPIADISQRINAKRWGEIDKHSYTLYLEQRFEVNLFNFGAGYYQNF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEEEEEEEEEECCCHHHHCC
GNANELIGRWGNPISIDIWTGSAYDIGQSLNDIIGRNAITGFGYIGANYSSFDWKILGRG
CCHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECC
TNSPRSAEQSVAFILNYQIREDIAVGGKLEWFSDTTKKGYSPLGGSYQSQNNGGTMLTQN
CCCCCCHHHCEEEEEEEEEHHHHCCCCEEEECCCCHHCCCCCCCCCCCCCCCCCEEEECC
RKDDRSHAFFYIRHIF
CCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA