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The map label for this gene is citT [H]

Identifier: 32265521

GI number: 32265521

Start: 23613

End: 24287

Strand: Direct

Name: citT [H]

Synonym: HH0022

Alternate gene names: 32265521

Gene position: 23613-24287 (Clockwise)

Preceding gene: 32265520

Following gene: 32265522

Centisome position: 1.31

GC content: 35.11

Gene sequence:

>675_bases
ATGAATCTTGATGCACTAAGCAAACTCACTATTTTGTATGCCGAGGATGATACCGACACAGCCAATCTTACGAATATGGT
GCTTGGAGATTATGTAGGACGCCTACTTATTGCCAAAAATGGACAAGAAGCGCTCAATCTCTTCAAACTCCATAAGATTG
ATTTAGTTTTAACAGATATACTTATGCCAAAAATGAATGGTATTGAGCTCATTAACGCTATTCGTAACTCATACACGCAC
CCAGATGTGCCCGTAGTGATTACTACTGCACATACAGAGACAAAATACCTTCTTGATGCTATTCGCTTACGCGTAGATGG
CTACATTTTAAAACCTATTAATGTTGAAGAGCTACTCCACGCACTCAATAAGGCAATCTTACCTTTCTTACAGGCTGATG
AGCTTGCCTCAAAAAATCTTCTTATTAACGCCATTTCTACCTTTGTAGGTGGCAAAAAAATTGCCATCATTCAATTTCTC
TTAGCAAACTGCGATGAGGACAATATATTTTATGGCTCTTATGAAGATATTATTGCGCATTTACACGTGAGTAAGCCAAC
GATTGTAAAAACTTTTAAACAACTTATCGATACAGGAATTCTTATTAAAATTAAGAATAAAGTTTATAAAATTCACCCTG
ATTTAGACCAAAATATTAAAAATAGTATTATCTAA

Upstream 100 bases:

>100_bases
CTCAATGGCACAATAAGCGTATCTAATACACAATGGGGTAAGCAGAACCAATATTTTGGAGCAGAATTTACCATTCACAT
ACCAATACAAAAGGATAATT

Downstream 100 bases:

>100_bases
AATACATACTCACTCTTGACTTCAAAGGAAGTTTTGATTAGAATCTGCATTTCAATCTTTTTGAAGACTCCTTTGGAGTA
GGCTTTAGAATCAAATGTAG

Product: two-component response regulator family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNLDALSKLTILYAEDDTDTANLTNMVLGDYVGRLLIAKNGQEALNLFKLHKIDLVLTDILMPKMNGIELINAIRNSYTH
PDVPVVITTAHTETKYLLDAIRLRVDGYILKPINVEELLHALNKAILPFLQADELASKNLLINAISTFVGGKKIAIIQFL
LANCDEDNIFYGSYEDIIAHLHVSKPTIVKTFKQLIDTGILIKIKNKVYKIHPDLDQNIKNSII

Sequences:

>Translated_224_residues
MNLDALSKLTILYAEDDTDTANLTNMVLGDYVGRLLIAKNGQEALNLFKLHKIDLVLTDILMPKMNGIELINAIRNSYTH
PDVPVVITTAHTETKYLLDAIRLRVDGYILKPINVEELLHALNKAILPFLQADELASKNLLINAISTFVGGKKIAIIQFL
LANCDEDNIFYGSYEDIIAHLHVSKPTIVKTFKQLIDTGILIKIKNKVYKIHPDLDQNIKNSII
>Mature_224_residues
MNLDALSKLTILYAEDDTDTANLTNMVLGDYVGRLLIAKNGQEALNLFKLHKIDLVLTDILMPKMNGIELINAIRNSYTH
PDVPVVITTAHTETKYLLDAIRLRVDGYILKPINVEELLHALNKAILPFLQADELASKNLLINAISTFVGGKKIAIIQFL
LANCDEDNIFYGSYEDIIAHLHVSKPTIVKTFKQLIDTGILIKIKNKVYKIHPDLDQNIKNSII

Specific function: Member of the two-component regulatory system CitT/CitS. Regulates the expression of the citM-yflN operon. Phosphorylated CitT binds to the citM promoter to activate the transcription of the citM-yflN operon [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR013196
- InterPro:   IPR001789 [H]

Pfam domain/function: PF08279 HTH_11; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25115; Mature: 25115

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDALSKLTILYAEDDTDTANLTNMVLGDYVGRLLIAKNGQEALNLFKLHKIDLVLTDI
CCCCHHCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHH
LMPKMNGIELINAIRNSYTHPDVPVVITTAHTETKYLLDAIRLRVDGYILKPINVEELLH
HHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCHHHHHH
ALNKAILPFLQADELASKNLLINAISTFVGGKKIAIIQFLLANCDEDNIFYGSYEDIIAH
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCHHHHHHH
LHVSKPTIVKTFKQLIDTGILIKIKNKVYKIHPDLDQNIKNSII
HCCCCCHHHHHHHHHHCCCEEEEEECCEEEECCCCCHHHHHCCC
>Mature Secondary Structure
MNLDALSKLTILYAEDDTDTANLTNMVLGDYVGRLLIAKNGQEALNLFKLHKIDLVLTDI
CCCCHHCEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHH
LMPKMNGIELINAIRNSYTHPDVPVVITTAHTETKYLLDAIRLRVDGYILKPINVEELLH
HHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCHHHHHH
ALNKAILPFLQADELASKNLLINAISTFVGGKKIAIIQFLLANCDEDNIFYGSYEDIIAH
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCHHHHHHH
LHVSKPTIVKTFKQLIDTGILIKIKNKVYKIHPDLDQNIKNSII
HCCCCCHHHHHHHHHHCCCEEEEEECCEEEECCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377; 10972810 [H]