| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is 32265519
Identifier: 32265519
GI number: 32265519
Start: 20820
End: 22151
Strand: Direct
Name: 32265519
Synonym: HH0020
Alternate gene names: NA
Gene position: 20820-22151 (Clockwise)
Preceding gene: 32265518
Following gene: 32265520
Centisome position: 1.16
GC content: 30.56
Gene sequence:
>1332_bases ATGCTAGAAAACGAGATTCGTATGGCAATTTTGCATTTTTATAATCAATGTGGTTTGGGGGCTTTTGTGCATTATGATAA AAATCAACTTCAGGTTATAACACACATCAAAAATCACACCCATAATCTTTATGTGCAGCGCATTTGCGATTTTTTAAAAA AACATAAATTCACGCTTTATAAACAAGAACCTTCCAAAGAAGATTTTGAGGAACTTTTTCATTTTGTAGATACAACACTT GATTTAAATACCCAAAGCACCAAACGCGAAATGATAAAAATTGCTTTGCGCAATGTATTTGGCATACAAGCGCGCGATGC TTTATTTTTTAAAGACGGCAATATTAAGCTTTTTAAATTTGATTATGAAATAGTAAAAATCAATAATGAAATCCGCCAAA TTAATCGGAACTCCCATATAAATGTCCTAAGTAATGAAGATAGAATGGTGCTTGATAATGCGCTCTCTATGACAAATGTC CAATCTCTTATTATCCAAAATACGCTTCTAATACTGCAAAAAGATATTGACTTAAAACAGATTGACAATCTAGGCTTTAA CAAAAGATTTAAGTTTTTTGCTATTCAAAAATTGCGTGTATATATTGAAAGTTTGCAATTACATCATATAGATTCTTTAG CAAAGAGTATTTATTGTATGGATATAGCCCAACAATATGCGTGGGTTATGTTTGAAATTGTAGCAAAAGAACTCCTAGAG CTATGTGCGAAAGATAATGTGAATGCCATTGCATTTATTGAATTTTATAATGGAGGCTCTATTGAATTAAGGGGCAAGAT TTTCAAAAAGCCTCTTATTACTGATAATAATGGTAATCCTTGGACTATACCGCTTATTAAGGAATGCTTAAAAAATAAAA AAGCCATAGAGTTTGATATATCTCAAATGCAAAAACGTTTAGATGATTTTGAAGAGAAAATCCATAGTATCAACAACCAA ATACAACAAAATGATACTGAAGAAAAAGATACCCTTACAAAAGAATCTTCCTATCAAGAACTTTTAGAATCTAAAAACAA AGAATTGCGTATGCTTGTAGATAAAAAAGCTTCAAAAGTATATATAGAAGCTATTACAAATGAAATTAACACGCTTATAC TTAATAAATCTAATATGCTTACATACATAGAAAATACACAAAAAAATCTCGCTGCTTTAGGCAAAGAACAAATAAAACTT CTTGAAATGCAAGAGAGACTAAGAGAGCAAATTAGCTATGCGCTTAAAAAGAATAGAGAATATTTTGTTCAATATGATTT ACTCTCACGTGCCCTTGCTGATGCCATAGCAAATGCAAAAGAGCTTATATGA
Upstream 100 bases:
>100_bases TCTCTATATTTTACAAGAGAGCTTTGATACTCATACGTGCATTGCAGATGCCAAAACACAAAGCCAAAAACATCTTTTTA CACTAATACAGGAAAATCCA
Downstream 100 bases:
>100_bases AAAATACCATTACCCACCTTATTGATAAAATTTCCTTCCAAGCACAAACAACCATTTTAGTATGGATTATTGTCATCGGA TTTACACTTATAGCAAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLYKQEPSKEDFEELFHFVDTTL DLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKFDYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNV QSLIIQNTLLILQKDIDLKQIDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDISQMQKRLDDFEEKIHSINNQ IQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKVYIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKL LEMQERLREQISYALKKNREYFVQYDLLSRALADAIANAKELI
Sequences:
>Translated_443_residues MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLYKQEPSKEDFEELFHFVDTTL DLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKFDYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNV QSLIIQNTLLILQKDIDLKQIDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDISQMQKRLDDFEEKIHSINNQ IQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKVYIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKL LEMQERLREQISYALKKNREYFVQYDLLSRALADAIANAKELI >Mature_443_residues MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLYKQEPSKEDFEELFHFVDTTL DLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKFDYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNV QSLIIQNTLLILQKDIDLKQIDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDISQMQKRLDDFEEKIHSINNQ IQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKVYIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKL LEMQERLREQISYALKKNREYFVQYDLLSRALADAIANAKELI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52064; Mature: 52064
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLY CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEE KQEPSKEDFEELFHFVDTTLDLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKF ECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE DYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNVQSLIIQNTLLILQKDIDLKQ EEEEEEECHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDI HHHCCCCCEEEEEEEECCCCEEEECHHHCCCCEECCCCCEEEEHHHHHHHCCCCEEEECH SQMQKRLDDFEEKIHSINNQIQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKV HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH YIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKLLEMQERLREQISYALKKNRE HHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YFVQYDLLSRALADAIANAKELI HEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLY CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEE KQEPSKEDFEELFHFVDTTLDLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKF ECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE DYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNVQSLIIQNTLLILQKDIDLKQ EEEEEEECHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDI HHHCCCCCEEEEEEEECCCCEEEECHHHCCCCEECCCCCEEEEHHHHHHHCCCCEEEECH SQMQKRLDDFEEKIHSINNQIQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKV HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH YIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKLLEMQERLREQISYALKKNRE HHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YFVQYDLLSRALADAIANAKELI HEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA