| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535272
Identifier: 308535272
GI number: 308535272
Start: 2215233
End: 2216021
Strand: Direct
Name: 308535272
Synonym: NA
Alternate gene names: NA
Gene position: 2215233-2216021 (Clockwise)
Preceding gene: 197118296
Following gene: 197118302
Centisome position: 48.0
GC content: 50.32
Gene sequence:
>789_bases ATGGCAAGAGCTAACAGGCACCACATACCAGGGCAGGTATGGCACATTACCCATCGGTGCCATAAAAAGGAATTCCTGCT GAAGTTCGCCAAGGATCGACAACGTTGGCGCTACTGGCTTTTCGAGGCCAGAAAGCGCTTTGGTCTTCAAGTGCTGAATT ATACGGCCACGTCAAATCATATTCATCTTCTGGTCGTTGATAATCACATGGATACCATACCGAAGAGTCTGCAGTTGATC GCTGGCAGGACCGCTCAAGAATATAACCAGCGAAAGGAGCGTAACGGTGCTTTCTGGGAGGATCGCTACCATGCGACGGC AATCGATCACGACGAGCACCTACTCCGCTGCCTGGTTTACATAGACCTGAACATGATCCGAGCCGGTGTTGTGAGCCACC CTTCGGAGTGGGATATGAATGGGTACAACGAGATCCAGAAGCCTCCCATCCGCTATGGTGTGATTGATCACCAGGAACTG CAGCGACTGTGTGGAATTTCTGACCCGCAAAAATTTAAGGAACAGTACAAGCAGTGGGTAGAGGTTGCCCTTACTGGCGG TAGCGTGGAGCGAGAAAGCAGTTGGACAGAAAGCGTGGCGGTGGGCAATCGAAAATTTATAGAAGAGGTCAAGGCACGCC TTGGAATTCAAGCCATTGGGAAAAAGATTCGGGAGCAAGGTGGGACCCTGCTTACTCTGCGCGAGGAATCCGCTGCTTAC AATGCTGATTATGGCGTCAAAAAGGGCGCTTTAAGCCTCCAAAACACTTATTTTTGGGATATTAGCTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Transposase Of ISGbem_B; Conserved Domain Protein
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
NA
Sequences:
>Translated_262_residues MARANRHHIPGQVWHITHRCHKKEFLLKFAKDRQRWRYWLFEARKRFGLQVLNYTATSNHIHLLVVDNHMDTIPKSLQLI AGRTAQEYNQRKERNGAFWEDRYHATAIDHDEHLLRCLVYIDLNMIRAGVVSHPSEWDMNGYNEIQKPPIRYGVIDHQEL QRLCGISDPQKFKEQYKQWVEVALTGGSVERESSWTESVAVGNRKFIEEVKARLGIQAIGKKIREQGGTLLTLREESAAY NADYGVKKGALSLQNTYFWDIS >Mature_261_residues ARANRHHIPGQVWHITHRCHKKEFLLKFAKDRQRWRYWLFEARKRFGLQVLNYTATSNHIHLLVVDNHMDTIPKSLQLIA GRTAQEYNQRKERNGAFWEDRYHATAIDHDEHLLRCLVYIDLNMIRAGVVSHPSEWDMNGYNEIQKPPIRYGVIDHQELQ RLCGISDPQKFKEQYKQWVEVALTGGSVERESSWTESVAVGNRKFIEEVKARLGIQAIGKKIREQGGTLLTLREESAAYN ADYGVKKGALSLQNTYFWDIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30642; Mature: 30511
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARANRHHIPGQVWHITHRCHKKEFLLKFAKDRQRWRYWLFEARKRFGLQVLNYTATSNH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCE IHLLVVDNHMDTIPKSLQLIAGRTAQEYNQRKERNGAFWEDRYHATAIDHDEHLLRCLVY EEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH IDLNMIRAGVVSHPSEWDMNGYNEIQKPPIRYGVIDHQELQRLCGISDPQKFKEQYKQWV HHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHH EVALTGGSVERESSWTESVAVGNRKFIEEVKARLGIQAIGKKIREQGGTLLTLREESAAY HHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCCCC NADYGVKKGALSLQNTYFWDIS CCCCCCCCCCEEECCCEEEECC >Mature Secondary Structure ARANRHHIPGQVWHITHRCHKKEFLLKFAKDRQRWRYWLFEARKRFGLQVLNYTATSNH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCE IHLLVVDNHMDTIPKSLQLIAGRTAQEYNQRKERNGAFWEDRYHATAIDHDEHLLRCLVY EEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH IDLNMIRAGVVSHPSEWDMNGYNEIQKPPIRYGVIDHQELQRLCGISDPQKFKEQYKQWV HHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHH EVALTGGSVERESSWTESVAVGNRKFIEEVKARLGIQAIGKKIREQGGTLLTLREESAAY HHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCCCC NADYGVKKGALSLQNTYFWDIS CCCCCCCCCCEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA